Protein Alignment Sxl and Hnrnpab

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: XP_006246407.1
• Gene: Hnrnpab / 83498
• RGDID: 69255
• Length: 332
• Species: Rattus norvegicus
• Alignment Length: 242
• Identity: 53/242 - (21%)
• Similarity: 89/242 - (36%)
• Gaps: 45/242 - (18%)

  Fly    60 PGCGGSGGNGGSANNLGGGNMCHLPPMASNNSLNNLCGLSLGSGGSDDLMNDPRASNT--NLIVN 122
            ||........||    |||...  .|..:.|            |...|.:|..:....  .:.|.
  Rat    34 PGAAAPATPAGS----GGGTTA--APSGNQN------------GAEGDQINASKNEEDAGKMFVG 80

  Fly   123 YLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKV-------LNG 180
            .|..|.:.::|...|...|.:..|.|..|..||.|.|:.|:.|   .||....||       |:|
  Rat    81 GLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF---KDSSSVEKVLDQKEHRLDG 142

  Fly   181 ITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRG 245
            ..:..|:.......|    :|  .::|..|....|::::...||::|.|....:..|....:.||
  Rat   143 RVIDPKKAMAMKKDP----VK--KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRG 201

  Fly   246 VAFVRYNKREEAQEAISALNNVIPEGGS-------QPLSVRLAEEHG 285
            ..|:.:.:.:..::.:....:.:  .||       ||..|...:::|
  Rat   202 FVFITFKEEDPVKKVLEKKFHTV--SGSKCEIKVAQPKEVYQQQQYG 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	23/88 (26%)
		RRM2_Hu_like	203..281	CDD:240822	16/84 (19%)
Hnrnpab	XP_006246407.1	CBFNT	1..75	CDD:311868	12/58 (21%)
		RRM1_hnRNPAB	71..150	CDD:410151	22/81 (27%)
		RRM2_hnRNPAB	155..234	CDD:409997	15/86 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010