Protein Alignment Sxl and RBP-DR1

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: NP_567249.1
• Gene: RBP-DR1 / 828090
• AraportID: AT4G03110
• Length: 441
• Species: Arabidopsis thaliana
• Alignment Length: 449
• Identity: 99/449 - (22%)
• Similarity: 177/449 - (39%)
• Gaps: 103/449 - (22%)

  Fly   116 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAI----- 175
            :..|.|..:|:.|::.:|..||:....::...|::|..|..|.|..|:...|..::.:.:
plant    17 SVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVNACHN 81

  Fly   176 -KVLNGITVRNKRLKVSYARPGGESIK-DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDK 238
             |.|.|   .|..|:|.||  .||..: :..|:|..||:.:::.::.::|.|||:|....|||.
plant    82 KKTLPG---ANSLLQVKYA--DGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQILRG- 140

  Fly   239 LTGRPRGVAFVRYNKREEAQEAISALNNVIP-EGGSQPLSVRLA----EEHGK--AKAAHFMSQM 296
            .....:|.||::|..:|:|..|:.::|.... ||.:.||.|:.|    |.|.:  .||...::::
plant   141 AQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQKAQSHIARL 205

  Fly   297 -----------GVVPANVPPP--------PP------QPPAHMAAAFNMMHRDGAMEKLRSLFDA 336
                       |.:|....||        ||      .||....|||:.|..........:|...
plant   206 GNGDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYGYMLPPIQNQAAFSNMIAQPNQGNNNALQGT 270

  Fly   337 ICDAI--------FGLDSENFADLLDGLYRRKYH-----YPYLXLTPQQQQQLLQHQQQALGFTS 388
            ..|::        |.:...|:  :..|....:.|     ||...::|:.              .|
plant   271 SPDSVPPRLARRNFPMPPGNY--MGSGYPAMRGHPFPFAYPRGIVSPRP--------------LS 319

  Fly   389 SSNNSIGNG---------------NGNDN-NMLLYH--QQYHQQQTQQ--QRLGNVAAHNISPNG 433
            ||..||..|               .|.:. |:.:|:  :::..|:...  |..|.|.:..:..:.
plant   320 SSPGSISPGMSTPLGIGLSSVVQTEGPEGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDK 384

  Fly   434 SNNNINTSNTNNINFNTIRQNGVAAL---HYLQEQLQLQQPQDQQSQQQQPLTMPSSPP 489
            :..........:.:.....||.:..:   |...::|::|..:|..:.|      |||.|
plant   385 ATGVSKCFGFVSYDSQAAAQNAIDMMNGRHLGGKKLKVQLKRDSNNGQ------PSSNP 437

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	22/85 (26%)
		RRM2_Hu_like	203..281	CDD:240822	25/78 (32%)
RBP-DR1	NP_567249.1	RRM1_2_CELF1-6_like	19..95	CDD:409796	19/78 (24%)
		RRM1_2_CELF1-6_like	107..182	CDD:409796	24/75 (32%)
		U2AF_lg	<231..>423	CDD:273727	34/207 (16%)
		RRM3_CELF1-6	351..423	CDD:409797	9/71 (13%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24012
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010