Protein Alignment Sxl and UBA2A

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: NP_001190109.1
• Gene: UBA2A / 824853
• AraportID: AT3G56860
• Length: 478
• Species: Arabidopsis thaliana
• Alignment Length: 439
• Identity: 81/439 - (18%)
• Similarity: 126/439 - (28%)
• Gaps: 149/439 - (33%)

  Fly   111 DPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAI 175
            ||  .:..:.|:.|..|.....|...|:..|.|..|:.:.|..:|.|.||.|:.:.|...::.|:
plant   136 DP--VHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNAL 198

  Fly   176 K--------------------VLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLD 220
            |                    |..|..:....:.........|..: ..:||:|:...:...:|.
plant   199 KQPQKKIGSRMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQ-KKIYVSNVGAELDPQKLL 262

  Fly   221 TIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHG 285
            ..|.|:|.|.:..:..||.||||:|.....|...|.|:.|:                    ||..
plant   263 MFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRAL--------------------EEPH 307

  Fly   286 KAKAAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRDGAMEKLRSLFDAICDAIFGLDSENFA 350
            |....|.:.....:..      |:|
plant   308 KTFEGHILHCQKAIDG------PKP---------------------------------------- 326

  Fly   351 DLLDGLYRRKYHYPYLXLTPQQQQQLLQHQQQALGFTSSSNNSIGNGNGNDNNMLLYHQQYHQQQ 415
                |..::.:|.|:....|:.|:              :.||..|...|:.          |...
plant   327 ----GKQQQHHHNPHAYNNPRYQR--------------NDNNGYGPPGGHG----------HLMA 363

  Fly   416 TQQQRLGNVAAHNISP--NGSNNNINTSNTNNINFN-TIRQ---------------NGVAALHYL 462
            .....:|...|..|:|  ..:...:..|....:.|| .|.|               |||.
plant   364 GNPAGMGGPTAQVINPAIGQALTALLASQGAGLAFNPAIGQALLGSLGTAAGVNPGNGVG----- 423

  Fly   463 QEQLQLQQPQDQQSQQQQPLTMP--SSPPFQQQSRQSHHNGSSSTLGNQ 509
                   .|....:|...|.|||  .:.|..|...|:...|...|...|
plant   424 -------MPTGYGTQAMAPGTMPGYGTQPGLQGGYQTPQPGQGGTSRGQ 465

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	19/99 (19%)
		RRM2_Hu_like	203..281	CDD:240822	19/77 (25%)
UBA2A	NP_001190109.1	PABP-1234	136..>347	CDD:130689	52/297 (18%)
		RRM_SF	140..215	CDD:418427	17/74 (23%)
		Med15	361..>465	CDD:312941	23/115 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920