Protein Alignment Sxl and CP29

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: NP_001190079.1
• Gene: CP29 / 824514
• AraportID: AT3G53460
• Length: 363
• Species: Arabidopsis thaliana
• Alignment Length: 315
• Identity: 59/315 - (18%)
• Similarity: 102/315 - (32%)
• Gaps: 107/315 - (33%)

  Fly    81 CHLPPMASNNSLNNLCGLSLGSGGSDDLMND-----PRASNT-----NLIVNYLPQDMTDRELYA 135
            |..|....:..:.|:...|......||:..|     |...|:     .|.|..|..::...:|..
plant    53 CSSPAEYPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQ 117

  Fly   136 LFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRA---------------------IKVLN 179
            ||.:.|.:....::.|..||.|.|:.||..::..:.:.|                     |:||.
plant   118 LFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYVSRYLCSLLCLYLLIRVLC 182

  Fly   180 GITVRNKRLKVSYARP------------------------------------------------- 195
            |:....:.|:|:...|
plant   183 GLEFEGRPLRVNAGPPPPKREESFSRGPRSGGYGSERGGGYGSERGGGYGSERGGGYGSERGGGY 247

  Fly   196 -----------------------GGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRD 237
                                   |..|.....|||.||...:.|..|:.:|.:.|.:|:..::.|
plant   248 GSQRSGGGYGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYD 312

  Fly   238 KLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAAHF 292
            :.:||.:|..||..:..:|.|:||::||....:|    ..:|::|...:.....|
plant   313 RDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDG----RQIRVSEAEARPPRGQF 363

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	22/177 (12%)
		RRM2_Hu_like	203..281	CDD:240822	24/77 (31%)
CP29	NP_001190079.1	RRM_SF	100..194	CDD:302621	20/93 (22%)
		RRM_HP0827_like	279..355	CDD:240845	25/79 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920