Protein Alignment Sxl and AT2G21440

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: NP_565513.1
• Gene: AT2G21440 / 816683
• AraportID: AT2G21440
• Length: 1003
• Species: Arabidopsis thaliana
• Alignment Length: 631
• Identity: 111/631 - (17%)
• Similarity: 196/631 - (31%)
• Gaps: 259/631 - (41%)

  Fly    93 NNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS 157
            |.:....||..||       :|....||:..||......::..:|.|:|.:....|.::::||..
plant   314 NLIWARQLGGEGS-------KAQKWKLIIRNLPFQAKPSDIKVVFSAVGFVWDVFIPKNFETGLP 371

  Fly   158 FGYAFVDFTSEMDSQRAIKVLNG-------ITV-------------------------------- 183
            .|:|||.||.:.|:..|||..||       |.|
plant   372 KGFAFVKFTCKKDAANAIKKFNGHMFGKRPIAVDWAVPKNIYNGAADATTASADGDKEGSDGDSE 436

  Fly   184 -----------------------------RNK--------------------------------- 186
                                         .||
plant   437 NSSVDLEEVDEAVESHPPPGDDTDDDEDGSNKLTESDALDKDVGTDMNFEDEADVARKVLKNLLA 501

  Fly   187 -------------------RLKVSYARPGGESI----------------KDT--------NLYVT 208
                               :||.|..:|..:|.                |:|        .|::.
plant   502 SSKGSTATPEGETEESDKSKLKSSSTKPVADSSGVSEPLKSGKTKVVAPKETQDNDDFERTLFIR 566

  Fly   209 NLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALN-------- 265
            |||..:|.:::...|..:|.:...:::..|:|.||.|.|||::...:.:..||||.:
plant   567 NLPFDVTKEEVKQRFTVFGEVESLSLVLHKVTKRPEGTAFVKFKTADASVAAISAADTASGVGVL 631

  Fly   266 ------NVIPEGG---SQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMM 321
                  ||:...|   ::.:.::..||........::::.|.:..:.|           ||..:.
plant   632 LKGRQLNVMRAVGKKAAKDIELKKTEEKNVDHRNLYLAKEGQILDDTP-----------AAEGVS 685

  Fly   322 HRDGAMEKLRSLFDAICDAIFGLDSENFADLLDGLYRRK---YHYPYLXLTPQQQQQLLQHQQQA 383
            ..|  |:|.|.|.:   :.:..|.|.||     .:.|.:   |:.| ..:.|:|..:||..
plant   686 AED--MDKRRRLHE---NKMKMLQSPNF-----HVSRTRLVIYNLP-KSMNPKQLNRLLVD---- 735

  Fly   384 LGFTSSSNNSIGNGNGNDNNMLLYHQQYHQQQTQQQRLGNVAAHNISPNGSNNNINTSNTNN--- 445
             ..||                         :.|:|:..  :.......|.....::|.|.:.
plant   736 -AVTS-------------------------RATKQKPC--IRQIKFLQNEKKGKVDTKNYSRGVA 772

  Fly   446 -INFNTIRQNGVAALHYLQEQLQLQQPQD----------------QQSQQQQPLTMPSSPPFQQQ 493
             :.| |..::.:.||..|....:...||.                ::::|||         |||:
plant   773 FVEF-TEHEHALVALRVLNNNPETFGPQHRPVIEFAVDNVQKLKIREAKQQQ---------FQQR 827

  Fly   494 SRQSHHNGSSSTLGNQLLAISNNNSFNNNSNQSNSFTGNYSNGSAF 539
            .:   ||.|.....|. .|.:.:|.:...:.:.::......|.:.|
plant   828 EK---HNESDQQQANG-EAQAPDNKYKRKTREGDNTGPRKENAARF 869

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	30/199 (15%)
		RRM2_Hu_like	203..281	CDD:240822	23/102 (23%)
AT2G21440	NP_565513.1	RRM1_RBM28_like	21..99	CDD:240859
		ELAV_HUD_SF	24..411	CDD:273741	30/103 (29%)
		RRM_SF	<291..>316	CDD:302621	1/1 (100%)
		RRM2_RBM28_like	332..408	CDD:240860	24/75 (32%)
		RRM3_RBM28_like	561..642	CDD:240861	21/80 (26%)
		RRM4_RBM28_like	713..810	CDD:240862	20/130 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910