Protein Alignment Sxl and hnrnpa3

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: NP_001315077.1
• Gene: hnrnpa3 / 751729
• ZFINID: ZDB-GENE-060224-1
• Length: 340
• Species: Danio rerio
• Alignment Length: 506
• Identity: 86/506 - (16%)
• Similarity: 133/506 - (26%)
• Gaps: 215/506 - (42%)

  Fly   119 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFT--SEMD---SQRAIKVL 178
            |.:..|..:.|:..|.|.|...|.:..|.:|||.....|.|:.||.::  ||:|   :.|..||
Zfish    15 LFIGGLSFETTEDSLRAHFEQWGKLTDCVVMRDPANKRSRGFGFVTYSSVSEVDAAMTARPHKV- 78

  Fly   179 NGITVRNKRL--KVSYARPGGE-SIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLT 240
            :|..|..||.  :....:||.. ::|  .::|..:.....:..:...|..||.|...:|:.::.|
Zfish    79 DGRVVEPKRAVSREDSNKPGAHLTVK--KIFVGGIKEDTEEYHIREYFECYGKIETIDIMEERST 141

  Fly   241 GRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPP 305
            |:.||..||.:                              ::|
Zfish   142 GKKRGFCFVTF------------------------------DDH--------------------- 155

  Fly   306 PPPQPPAHMAAAFNMMHRDGAMEKLRSLFDAICDAIFGLDSENFADLLDGLYRRKYH------YP 364
                                                         |.:|.:..:|||      ..
Zfish   156 ---------------------------------------------DTVDKIVAQKYHTINSHNCE 175

  Fly   365 YLXLTPQQQQQLLQHQQQALG----FTSSSNN----SIGNGNGNDNNMLLYHQQYHQQQTQQQRL 421
            .. ..|:|:.|...:|:...|    ||....|    ..|.|.|..:..
Zfish   176 VRKALPKQEMQSSSNQRYRGGGGGNFTGRGGNFGRGGYGGGRGGGDGY----------------- 223

  Fly   422 GNVAAHNISPNGSNNNINTSNTNNINFNTIRQNGVAALHYLQEQLQLQQPQDQQSQQQQPLTMPS 486
                      ||...|..                                              .
Zfish   224 ----------NGFGGNYG----------------------------------------------G 232

  Fly   487 SPPFQQQSRQSHHNGSSSTLGNQLLAISNNNSFN--NNSNQSNSFTGNYSNGSAFTSNGAISGSN 549
            .|......|..:  |.....|||    .....|.  :|.|...:|.||:..|..  |:|...|.|
Zfish   233 GPGGYGGGRGGY--GGGPGYGNQ----GGGGGFGGFDNYNDRGNFGGNFGGGGG--SSGGGGGGN 289

  Fly   550 FPNNPTSSGNFTNNSTNSNPTNSGHFASNLAGSSNFTNHLSGSNNYTNSNG 600
            :    ...||:....:|..|....:|....:|.       .|...|.:..|
Zfish   290 Y----NDFGNYGGQQSNFGPMKGNNFGGRNSGP-------YGGGGYGSGGG 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	26/84 (31%)
		RRM2_Hu_like	203..281	CDD:240822	12/77 (16%)
hnrnpa3	NP_001315077.1	RRM1_hnRNPA_like	14..91	CDD:241022	25/76 (33%)
		RRM2_hnRNPA3	104..183	CDD:241026	20/176 (11%)
		HnRNPA1	<296..>315	CDD:288479	3/18 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.920