Sequence 1: | NP_001259303.1 | Gene: | Sxl / 3772180 | FlyBaseID: | FBgn0264270 | Length: | 722 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012814656.1 | Gene: | hnrnpab / 734098 | XenbaseID: | XB-GENE-6042555 | Length: | 326 | Species: | Xenopus tropicalis |
Alignment Length: | 250 | Identity: | 50/250 - (20%) |
---|---|---|---|
Similarity: | 91/250 - (36%) | Gaps: | 48/250 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 43 TEFSFPSSSSRRGYNDFPGCGGSGGNGGSANNLGGGNMCHLPPMASNNSLNNLCGLSLGSGGSDD 107
Fly 108 L-----MNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTS 167
Fly 168 EMDSQRAIKV----LNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGS 228
Fly 229 IVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI-SALNNVIPEGGSQPLSVRLAE 282 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sxl | NP_001259303.1 | RRM1_SXL | 117..197 | CDD:241093 | 19/83 (23%) |
RRM2_Hu_like | 203..281 | CDD:240822 | 16/78 (21%) | ||
hnrnpab | XP_012814656.1 | CBFNT | 1..52 | CDD:311868 | 11/65 (17%) |
RRM1_hnRNPAB | 66..140 | CDD:241201 | 18/73 (25%) | ||
RRM2_hnRNPAB | 145..224 | CDD:241028 | 19/88 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |