Protein Alignment Sxl and celf3a

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: XP_021323804.1
• Gene: celf3a / 57922
• ZFINID: ZDB-GENE-000501-2
• Length: 458
• Species: Danio rerio
• Alignment Length: 486
• Identity: 106/486 - (21%)
• Similarity: 179/486 - (36%)
• Gaps: 162/486 - (33%)

  Fly   114 ASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDF---TSEMDSQRAI 175
            |....|.:..:|:::.:::|..:|...|.|....:::|..||...|.||:.:   .|.:.:|.|:
Zfish     4 ADAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNAL 68

  Fly   176 ---KVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRD 237
               |.|.|:   |:.::|..|...|..  |..|:|..|.:.::|..:..:|..:|||.:..:||.
Zfish    69 HEQKTLPGM---NRPIQVKPADSEGRG--DRKLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRG 128

  Fly   238 KLTGRPRGVAFVRYNKREEAQEAISAL--NNVIPEGGSQPLSVRLAE---EHGKAKAAHFMSQMG 297
            . .|..:|.|||:|....|||.|||||  :..:| |.|..|.|:.|:   |.|..:.....||:|
Zfish   129 P-DGASKGCAFVKYQSNAEAQAAISALHGSRTLP-GASSSLVVKFADTEKERGIRRMQQVASQLG 191

  Fly   298 VV-------------------------------------------------------------PA 301
            |:                                                             |:
Zfish   192 VISPMSLHLGAYNAYTQALVQQQALVAQSAYLSPVATVAAVQMQQLAALNPSSIIATPIASITPS 256

  Fly   302 NV---------------------PPP------PPQPPA-HMAAAFNMMHRDG---------AMEK 329
            :|                     |||      ||.|.| :..:|...::.:|         |::.
Zfish   257 SVCNCAVGTSTPPTIAATPVPALPPPIAVNSYPPVPAAPNGQSASEALYTNGVHPYQAQSPALDP 321

  Fly   330 LRSL------FDAICDAIFGLDSENFADLLDGLYRRKYHYPYL-XLTPQQQQQLLQHQQQALGFT 387
            |:..      :.|...|.:||..:.|.           |.|.|  ..|||.|||.|.:
Zfish   322 LQQAYTGMQHYTATYPAAYGLVGQPFP-----------HQPTLVAQQPQQPQQLQQRE------- 368

  Fly   388 SSSNNSIGNGNGNDN-NMLLYH--QQYHQQQTQQQRL--GNVAAHNISPNGSNNNINTSNTNNIN 447
                       |.:. |:.:||  |::...:..|..|  |||.:..:..:.:.|........:.:
Zfish   369 -----------GPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFD 422

  Fly   448 FNTIRQNGVAALHYLQ-----EQLQLQQPQD 473
            .....|..:.|::..|     .::||::|:|
Zfish   423 NPASAQAAIQAMNGFQIGMKRLKVQLKRPKD 453

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	21/85 (25%)
		RRM2_Hu_like	203..281	CDD:240822	29/79 (37%)
celf3a	XP_021323804.1	RRM1_CELF3_4_5_6	2..88	CDD:241076	22/86 (26%)
		RRM2_CELF3_4_5_6	93..173	CDD:241079	30/81 (37%)
		Atrophin-1	<225..348	CDD:331285	17/122 (14%)
		RRM3_CELF3_4_5_6	369..447	CDD:241083	14/77 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910