back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Sxl and zcrb1

DIOPT Version :9

Sequence 1:	NP_001259303.1	Gene:	Sxl / 3772180	FlyBaseID:	FBgn0264270	Length:	722	Species:	Drosophila melanogaster
Sequence 2:	NP_001017589.2	Gene:	zcrb1 / 550251	ZFINID:	ZDB-GENE-041210-114	Length:	218	Species:	Danio rerio

Alignment Length:	134	Identity:	37/134 - (27%)
Similarity:	63/134 - (47%)	Gaps:	27/134 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   196 GGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEA 260
            ||.:...:.:||:|:|.::|:..:..:..|||.:|:..|::||.|...:|||||.:..||.|...
Zfish     3 GGLAPSKSTVYVSNIPFSLTNSDMHKLCSKYGKVVKVTIVKDKHTRMSKGVAFVLFLDRESAYNC 67

  Fly   261 ISALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMG------------------VVPANV---- 303
            ..:|||....|  :.:...:|.::|  :||.|:.:..                  ..|.|:
Zfish    68 SRSLNNKQLFG--RMVKASIAIDNG--RAAEFIRKRNYTDKSKCYECGEEGHLSYACPKNLLGER 128

  Fly   304 -PPP 306
             |||
Zfish   129 EPPP 132

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.