DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sxl and eif3g

DIOPT Version :9

Sequence 1:NP_001259303.1 Gene:Sxl / 3772180 FlyBaseID:FBgn0264270 Length:722 Species:Drosophila melanogaster
Sequence 2:NP_001016749.1 Gene:eif3g / 549503 XenbaseID:XB-GENE-6070198 Length:310 Species:Xenopus tropicalis


Alignment Length:118 Identity:36/118 - (30%)
Similarity:56/118 - (47%) Gaps:17/118 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 HLPPMASNNSLNNLCGLSLGSGGS---DDLMNDPRA-SNTNLIVNYLPQDMTDRELYALFRAIGP 142
            ::||             ||..|||   :.:..:.|| .|..:.|..|.:|..:.:|..|||..|.
 Frog   203 YVPP-------------SLRDGGSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGS 254

  Fly   143 INTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 195
            |:...:.:|..||.|.|:||:.|....|:.|||..::|....:..|.|.:|:|
 Frog   255 ISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKP 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SxlNP_001259303.1 RRM1_SXL 117..197 CDD:241093 26/79 (33%)
RRM2_Hu_like 203..281 CDD:240822
eif3gNP_001016749.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
eIF3g 45..164 CDD:372066
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..229 9/38 (24%)
RRM_eIF3G_like 230..306 CDD:240854 24/75 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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