Protein Alignment Sxl and rbms2b

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: NP_001003541.1
• Gene: rbms2b / 445147
• ZFINID: ZDB-GENE-040801-51
• Length: 400
• Species: Danio rerio
• Alignment Length: 533
• Identity: 115/533 - (21%)
• Similarity: 170/533 - (31%)
• Gaps: 164/533 - (30%)

  Fly    53 RRGYNDFPGCGGSGGNGGSANNLGGGNMCHLPPMASNNSLNNLCGLSLGSGGSDDLMNDPRASNT 117
            |.|.|.:   .|.....|.............||..:..|.:|  |   .|.|.|.|      |.|
Zfish     8 RTGINPY---NGYTSRTGKKQAYASSTQQMAPPSPNTTSSSN--G---SSSGGDQL------SKT 58

  Fly   118 NLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGIT 182
            ||.:..|....||::|..|.:..|.|.:.:.:.|..|....||.||||.|...:|:|:..|....
Zfish    59 NLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPASAQKAVTALKASG 123

  Fly   183 VRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 247
            |:.:..|.....|       ||||::|||.::.:.:|:::...:..::...|||| ..|..|||.
Zfish   124 VQAQMAKQQEQDP-------TNLYISNLPLSMDEQELESMLKPFSQVISTRILRD-ANGTSRGVG 180

  Fly   248 FVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPA 312
            |.|....|:.:..|...|                   ||.             ...||....|..
Zfish   181 FARMESTEKCEAIIQHFN-------------------GKY-------------IKTPPGVAVPTE 213

  Fly   313 HMAAAFNMMHRDGAMEKLRSLFDAICDAIFGLDSENFADLLDGLYRRKYHYPYLXLTPQQQQQLL 377
            .:...|    .||..:|.::                         :.|||         |..:..
Zfish   214 PLLCKF----ADGGQKKRQN-------------------------QGKYH---------QNGRQW 240

  Fly   378 QHQQQALGFTSSSNNSIGNGNGNDNNMLLYHQQYHQQQTQQQRLGNVAAHNISPNGSNNNINTSN 442
            ..:.:..|.|.:.:.:....||      .|...|   .....|:  :|..:|||. .::.::|..
Zfish   241 SREGETGGMTLTYDPTPALQNG------FYSPSY---SIAPNRI--IAQTSISPY-MHSPVSTYQ 293

  Fly   443 TNNINFNTIRQNGVAALHYLQEQLQLQQPQDQQSQQQQPLTMPSSP-----PFQQQSRQSHHNGS 502
            .:|.:             ::..|..|.||...........||...|     |..||.       |
Zfish   294 VHNPS-------------WIHHQSYLMQPTGTVLTPSVDHTMTIQPTAIIGPLTQQL-------S 338

  Fly   503 SSTLGNQLLAISNNNSFNNNSNQSNSFTGNYSNGSAFTSNGAISGSNFPNN---PTSSGNFTNNS 564
            ..|||.                     ||.|     ..:|.|:.|:..|..   |.||.....||
Zfish   339 HLTLGT---------------------TGTY-----MPANTAMQGTYIPQYAQVPPSSVTAEENS 377

  Fly   565 TN------SNPTN 571
            ..      ..||:
Zfish   378 VQQQQVGIETPTD 390

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	25/79 (32%)
		RRM2_Hu_like	203..281	CDD:240822	21/77 (27%)
rbms2b	NP_001003541.1	RRM_SF	53..136	CDD:302621	27/88 (31%)
		RRM2_MSSP2	137..222	CDD:240918	27/121 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910