DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Sxl and hnrnpa0

DIOPT Version :9

Sequence 1:	NP_001259303.1	Gene:	Sxl / 3772180	FlyBaseID:	FBgn0264270	Length:	722	Species:	Drosophila melanogaster
Sequence 2:	NP_988923.1	Gene:	hnrnpa0 / 394519	XenbaseID:	XB-GENE-1000573	Length:	309	Species:	Xenopus tropicalis

Alignment Length:	148	Identity:	38/148 - (25%)
Similarity:	72/148 - (48%)	Gaps:	7/148 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly   119 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIK----VLN 179
            |.:..|....|:..|...|...|.:..|.::.:.:|..|..:.||.::|..::..|::    |::
Frog    14 LFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTYSSAAEADAAVEASPHVVD 78

  Fly   180 GITVRNKRL--KVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGR 242
            |..|..||.  :...|:||..: |...|:|..|...:.:..|...|.::|::.:..|:.||::|:
Frog    79 GNNVELKRAVSREDSAKPGAHA-KVKKLFVGGLKEDVGESDLLEHFAQFGAVEKVEIIADKVSGK 142

  Fly   243 PRGVAFVRYNKREEAQEA 260
            .||..||.:...:.|.:|
Frog   143 KRGFGFVYFTNHDSADKA 160

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	20/83 (24%)
Sxl	NP_001259303.1	RRM2_Hu_like	203..281	CDD:240822	16/58 (28%)
hnrnpa0	NP_988923.1	RRM1_hnRNPA0	10..88	CDD:240772	18/73 (25%)
		RRM2_hnRNPA0	104..183	CDD:241023	16/57 (28%)
		HnRNPA1	255..>275	CDD:314495
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010