Sequence 1: | NP_001259303.1 | Gene: | Sxl / 3772180 | FlyBaseID: | FBgn0264270 | Length: | 722 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_956398.1 | Gene: | hnrnpa1b / 378453 | ZFINID: | ZDB-GENE-030912-14 | Length: | 422 | Species: | Danio rerio |
Alignment Length: | 596 | Identity: | 108/596 - (18%) |
---|---|---|---|
Similarity: | 164/596 - (27%) | Gaps: | 251/596 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 89 NNSLNNLCGLS----LGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIM 149
Fly 150 RDYKTGYSFGYAFVDFTS------EMDSQRAIKVLNGITVRNKRL--KVSYARP-GGESIKDTNL 205
Fly 206 YVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPE 270
Fly 271 GGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRDGAMEKLRSLFD 335
Fly 336 AICDAIFGLDSENFADLLDGLYRRKYHYPYLXLTPQ----QQQQLLQHQQQALGFTSSSNNSIGN 396
Fly 397 GNGNDNNMLLYHQQYHQQQTQQQRLGNVAAHNISPNGSNNNINTSNTNNINFNTIRQNGVAALHY 461
Fly 462 LQEQLQLQQPQDQQSQQQQPLTMPSSPPFQQQSRQSHHNGSSSTLGNQLLAISNNNSFNNNSNQS 526
Fly 527 NSFTGN------------YSNGSAFTSNGAISGSNFPNNPTSSGNFTNNSTNSNPTNSGHFASNL 579
Fly 580 A---GSSNFTNHLSGSNNYTNSNGNF--------------TSNAASSSNFSNNAASSTNYS--KN 625
Fly 626 CSSGVVGNSDP 636 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sxl | NP_001259303.1 | RRM1_SXL | 117..197 | CDD:241093 | 27/88 (31%) |
RRM2_Hu_like | 203..281 | CDD:240822 | 14/77 (18%) | ||
hnrnpa1b | NP_956398.1 | RRM | <19..187 | CDD:223796 | 47/268 (18%) |
RRM_SF | 31..111 | CDD:302621 | 26/82 (32%) | ||
RRM2_hnRNPA1 | 124..200 | CDD:241024 | 22/179 (12%) | ||
HnRNPA1 | 367..>387 | CDD:288479 | 5/19 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |