Sequence 1: | NP_001259303.1 | Gene: | Sxl / 3772180 | FlyBaseID: | FBgn0264270 | Length: | 722 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476667.1 | Gene: | pAbp / 37070 | FlyBaseID: | FBgn0265297 | Length: | 634 | Species: | Drosophila melanogaster |
Alignment Length: | 636 | Identity: | 123/636 - (19%) |
---|---|---|---|
Similarity: | 225/636 - (35%) | Gaps: | 155/636 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 118 NLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGIT 182
Fly 183 VRNKRLKVSYAR--PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRG 245
Fly 246 VAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQP 310
Fly 311 PAHMAAAFNMMHRDGAMEKLRSLFDAICDAIFGLDSENFADLLDGLYRRKYHYPYLXLTPQQQQQ 375
Fly 376 LLQHQQQALGF-----TSSSNNSIGNGNGND--NNMLLYHQQYHQQQTQQQRLG----------- 422
Fly 423 ------NVAAHNI-------------SPNGSNNNINTSNTNNINFNTIRQNGVAALHYLQEQLQL 468
Fly 469 QQPQDQQSQQQQPLTMPSSPPFQQQSRQSHHNGSSSTLGNQLLAISNNNSFNNNSN--QSNSFTG 531
Fly 532 NY-----SNGSAFTSNGAISGSNFPN----------------NPTSSGNFTNNSTNSNPTNSGHF 575
Fly 576 ASNLAGSSNFTNHLSGSNNYTNSNGNFTSNAASSSNFSNNAASSTNYSKNCS-------SGVVGN 633
Fly 634 SDPDSCSRKHTTNTNNHHTSPQHDFSFNMSTTEQELHQQTLKLQQLHLNNS 684 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sxl | NP_001259303.1 | RRM1_SXL | 117..197 | CDD:241093 | 29/80 (36%) |
RRM2_Hu_like | 203..281 | CDD:240822 | 18/77 (23%) | ||
pAbp | NP_476667.1 | PABP-1234 | 2..625 | CDD:130689 | 123/636 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24012 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |