Protein Alignment Sxl and Celf1

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: XP_038961339.1
• Gene: Celf1 / 362160
• RGDID: 1307721
• Length: 514
• Species: Rattus norvegicus
• Alignment Length: 576
• Identity: 123/576 - (21%)
• Similarity: 194/576 - (33%)
• Gaps: 188/576 - (32%)

  Fly    83 LPPMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCR 147
            ||.|..::...|...:|....|:.|..:.|......:.|..:|:..::::|..||...|.:....
  Rat     9 LPEMMVDHCSLNSSPVSKKMNGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEIN 73

  Fly   148 IMRDYKTG--YSFGYAFVDF---TSEMDSQRAI---KVLNGITVRNKRLKVSYA-RPGGESIKDT 203
            |:||....  .|.|..||.|   .:.:::|.|:   |||.|:   :..:::..| .....:::|.
  Rat    74 ILRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGM---HHPIQMKPADSEKNNAVEDR 135

  Fly   204 NLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNV- 267
            .|::..:.:..|::.:..:|..:|.|.:..|||.. .|..||.|||.:..|..||.||.|::..
  Rat   136 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVTFTTRTMAQTAIKAMHQAQ 199

  Fly   268 IPEGGSQPLSVRLA----EEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRDGAME 328
            ..||.|.|:.|:.|    ::..|..|.....||..:.|
  Rat   200 TMEGCSSPMVVKFADTQKDKEQKRMAQQLQQQMQQISA--------------------------- 237

  Fly   329 KLRSLFDAICDAIFGLDSENFADLLDGLYRRKYHYPYLXLTPQQQQQLLQHQQQALGFTSSSNNS 393
                      .:::|    |.|.|             ..|.||.....||..||    |::|
  Rat   238 ----------ASVWG----NLAGL-------------NTLGPQYLALYLQLLQQ----TANS--- 268

  Fly   394 IGNGNGNDNNMLLYHQQYHQQQTQQQRLGNV-----AAHNISPNGSNNNINTSNTNNINFNTIRQ 453
                 ||.|.:...|........|.|.|..:     ||.| :|:|:|
  Rat   269 -----GNLNTLSSLHPMGGLNAMQLQNLAALAAAASAAQN-TPSGTN------------------ 309

  Fly   454 NGVAALHYLQEQLQLQQPQDQQSQQQQPLTMPSSPPFQQQSRQSHHNGSSSTLGNQLLAISNNNS 518
                                       .||..|||                     |..::::..
  Rat   310 ---------------------------ALTTSSSP---------------------LSVLTSSAG 326

  Fly   519 FNNNSNQSNSFTGNYSNGSAFTSNGAISGSNFPNNPTSSGNFTNNSTNSNPTNSGHFASNLAGSS 583
            .:.:|:.|||.....|.|:..|..||.:|.|                          ..:|||.:
  Rat   327 SSPSSSSSNSVNPIASLGALQTLAGATAGLN--------------------------VGSLAGMA 365

  Fly   584 NFTNHL--SGSNNYTNSNGNFTSNAASSSNFSNNAASSTNYSKNC----SSGVVGN 633
            .....|  ||.:|.|.|.....:.|.|.......||..|.|::|.    |.|..|:
  Rat   366 ALNGGLGSSGLSNGTGSTMEALTQAYSGIQQYAAAALPTLYNQNLLTQQSIGAAGS 421

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	21/88 (24%)
		RRM2_Hu_like	203..281	CDD:240822	25/78 (32%)
Celf1	XP_038961339.1	RRM1_CELF1_2_Bruno	42..125	CDD:410040	20/85 (24%)
		RRM2_CELF1_2	134..214	CDD:410042	26/80 (33%)
		RRM3_CELF1_2	422..513	CDD:241082	123/576 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910