Sequence 1: | NP_001259303.1 | Gene: | Sxl / 3772180 | FlyBaseID: | FBgn0264270 | Length: | 722 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001018242.1 | Gene: | crp79 / 3361521 | PomBaseID: | SPAC1610.03c | Length: | 710 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 647 | Identity: | 111/647 - (17%) |
---|---|---|---|
Similarity: | 193/647 - (29%) | Gaps: | 232/647 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 98 LSLGSGGSDDL----MNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMR--DYKTGY 156
Fly 157 SFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY------------ARPGGES---------- 199
Fly 200 ----------------------------------------------------------------- 199
Fly 200 -------IKDTNLYVTNLPRTI--TDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKRE 255
Fly 256 EAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHMAAAFNM 320
Fly 321 MHRDGAMEKLRSLFDAICDAIFGLDSENFADLLDGLYRRKYHYPYLXLTPQQQQQLLQHQQQALG 385
Fly 386 FTS------SSNNSIGNGNGNDNNMLLYHQQYHQQQTQQQRLGNVAAHNISPNGSNNNINTSNTN 444
Fly 445 NINFNTIRQNGVAALHYLQEQLQLQQPQDQQSQQQQPLTMPSSPPFQQQSRQSHHNGSSSTLGNQ 509
Fly 510 LLAISNNNSFNNNSNQSNSFTGNYSNGSAFTSNGAISGSNFPNNPTSSGNFTNNSTNSNPTNSGH 574
Fly 575 FASNLAGSSNFTNHLSGSNNYTNSNGNFTSNAASSSNFSNNAASSTNYSKNCSSGVVGNSDP 636 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sxl | NP_001259303.1 | RRM1_SXL | 117..197 | CDD:241093 | 22/93 (24%) |
RRM2_Hu_like | 203..281 | CDD:240822 | 24/79 (30%) | ||
crp79 | NP_001018242.1 | RRM_RBM18 | 18..106 | CDD:240801 | |
RRM | 109..>289 | CDD:223796 | 27/111 (24%) | ||
RRM_SF | 205..276 | CDD:240668 | 19/73 (26%) | ||
RRM2_I_PABPs | 380..459 | CDD:240825 | 24/80 (30%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
1 | 0.960 |