Sequence 1: | NP_001259303.1 | Gene: | Sxl / 3772180 | FlyBaseID: | FBgn0264270 | Length: | 722 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259974.1 | Gene: | Rbp9 / 33498 | FlyBaseID: | FBgn0010263 | Length: | 684 | Species: | Drosophila melanogaster |
Alignment Length: | 761 | Identity: | 191/761 - (25%) |
---|---|---|---|
Similarity: | 312/761 - (40%) | Gaps: | 180/761 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 GNNNPGSNNNNGGYPPYGYNNKSSGGRGFGMSHSLPSGMDTEFSFPSSSSRRGYNDFPGCGGSGG 67
Fly 68 NGGSANNLGGGNMCHLPPMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRE 132
Fly 133 LYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGG 197
Fly 198 ESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 262
Fly 263 ALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVP-----PPPPQPPAHMAAAFNMMH 322
Fly 323 RD-GAMEKLRSLFDAI--------------------CDAIFGLDSENFADLLDGLYRRKYHYPYL 366
Fly 367 XLTPQQQQQLLQHQQ-QALGFTSSSNN-----SIGNGNGNDNNMLLYHQQYHQQQTQQQRL---- 421
Fly 422 -----GNVAAHNISPNGSNNNINTSNTNNINFNTIRQNGVAALHYLQEQLQLQQPQDQQSQQQQP 481
Fly 482 LTMPSSPPFQQQSRQSHHNGSSSTLGNQLLAISNNNSFNNNSNQSNSFTGNYSNGSAFTSNGAIS 546
Fly 547 GSNFPNNPTSSGNFTNNSTNSNPTNSGHFASNL-----AGSSNFTNHLSGSNNYTNSNGNFTSNA 606
Fly 607 ASSSNFSNNAASSTNYSKNCSSGVVGNSDPDSCSRKHTTNTNNHHTSPQHDFSFNMSTTEQELHQ 671
Fly 672 QTLKLQQLHLNNSFNNTTAAATTSAAASTSTSTTATASSTNSANVG 717 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sxl | NP_001259303.1 | RRM1_SXL | 117..197 | CDD:241093 | 39/79 (49%) |
RRM2_Hu_like | 203..281 | CDD:240822 | 31/77 (40%) | ||
Rbp9 | NP_001259974.1 | ELAV_HUD_SF | 107..438 | CDD:273741 | 101/338 (30%) |
RRM1_Hu | 109..186 | CDD:241094 | 36/79 (46%) | ||
RRM2_Hu | 196..274 | CDD:241096 | 31/77 (40%) | ||
RRM3_Hu | 355..432 | CDD:240823 | 13/81 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 67 | 1.000 | Domainoid score | I3499 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000313 | |
OrthoInspector | 1 | 1.000 | - | - | mtm1072 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |