Protein Alignment Sxl and hnrnpaba

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: NP_997752.2
• Gene: hnrnpaba / 321466
• ZFINID: ZDB-GENE-030131-185
• Length: 340
• Species: Danio rerio
• Alignment Length: 273
• Identity: 62/273 - (22%)
• Similarity: 102/273 - (37%)
• Gaps: 52/273 - (19%)

  Fly    39 SGMDTEFSFPSSSSRRGYNDFPGCGG-SGGNG----GSANNLGGGNMCHLPPMASNNSLNNLCGL 98
            |..:.::...|.:...|.:|..|.|. ..|||    |:..|.|...
Zfish     2 SDAEQQYMETSLNGHEGEDDLNGAGQYDQGNGDAQAGAQGNAGADG------------------- 47

  Fly    99 SLGSGGSDDLMNDPRASNTN---LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGY 160
            :.|..|:|....|......:   :.|..|..|.:.::|...|...|.:..|.|..|..||.|.|:
Zfish    48 TAGDDGADGGQIDASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGF 112

  Fly   161 AFVDF--TSEMDSQRAIKV--LNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDT 221
            .|:.|  .|.:|...|.|.  |:|..:..|:.......|    :|  .::|..|....|::::..
Zfish   113 GFILFKEPSGVDKVLAQKEHRLDGRQIDPKKAMAMKKEP----VK--KIFVGGLNPETTEERIRE 171

  Fly   222 IFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI--------SALNNVIPEGG------ 272
            .||.:|.|....:..|..:.:.||..|:.: |.|||.:.|        |...:...:.|
Zfish   172 YFGAFGEIETIELPMDPKSNKRRGFVFITF-KEEEAVKKILEKKYHNVSGTKDTSGKEGLCEIKI 235

  Fly   273 SQPLSVRLAEEHG 285
            :||..|...:::|
Zfish   236 AQPKEVYQQQQYG 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	23/86 (27%)
		RRM2_Hu_like	203..281	CDD:240822	21/91 (23%)
hnrnpaba	NP_997752.2	CBFNT	1..69	CDD:285369	16/85 (19%)
		RRM1_hnRNPAB	70..144	CDD:241201	22/73 (30%)
		RRM2_hnRNPAB	149..228	CDD:241028	19/85 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.010