Protein Alignment Sxl and HNRNPAB

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: NP_112556.2
• Gene: HNRNPAB / 3182
• HGNCID: 5034
• Length: 332
• Species: Homo sapiens
• Alignment Length: 251
• Identity: 52/251 - (20%)
• Similarity: 96/251 - (38%)
• Gaps: 36/251 - (14%)

  Fly    49 SSSSRRGYNDFP-GCGGSGGNGGSANNLGGGNMCHLPPMASNNSLNNLCGLSLGSGGSDDLMNDP 112
            :.::..|:...| |...:|...|:|...||....  ||..:.|            |...|.:|..
Human    13 TGATENGHEAVPEGESPAGAGTGAAAGAGGATAA--PPSGNQN------------GAEGDQINAS 63

  Fly   113 RASNT--NLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAI 175
            :....  .:.|..|..|.:.::|...|...|.:..|.|..|..||.|.|:.|:.|......::.:
Human    64 KNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVL 128

  Fly   176 KV----LNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILR 236
            ..    |:|..:..|:.......|    :|  .::|..|....|::::...||::|.|....:..
Human   129 DQKEHRLDGRVIDPKKAMAMKKDP----VK--KIFVGGLNPEATEEKIREYFGEFGEIEAIELPM 187

  Fly   237 DKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGS-------QPLSVRLAEEHG 285
            |....:.||..|:.:.:.|..::.:....:.:  .||       ||..|...:::|
Human   188 DPKLNKRRGFVFITFKEEEPVKKVLEKKFHTV--SGSKCEIKVAQPKEVYQQQQYG 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	19/85 (22%)
		RRM2_Hu_like	203..281	CDD:240822	17/84 (20%)
HNRNPAB	NP_112556.2	CBFNT	1..70	CDD:311868	14/70 (20%)
		RRM1_hnRNPAB	66..145	CDD:410151	18/78 (23%)
		RRM2_hnRNPAB	150..229	CDD:409997	16/86 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	2	1.920