Protein Alignment Sxl and Celf5

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: XP_038934951.1
• Gene: Celf5 / 314647
• RGDID: 1565016
• Length: 446
• Species: Rattus norvegicus
• Alignment Length: 454
• Identity: 95/454 - (20%)
• Similarity: 173/454 - (38%)
• Gaps: 120/454 - (26%)

  Fly   119 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDF---TSEMDSQRAI---KV 177
            |.|..:|:.:.:::|..||...|.|....:::|..||...|.||:.:   .|.:.:|.|:   |.
  Rat     9 LFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTALHEQKT 73

  Fly   178 LNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGR 242
            |.|:.   :.::|..|.......:|..|:|..|.:..:::.:..:|..:|.|.:..:||.. .|.
  Rat    74 LPGMA---RPIQVKPADSENRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGP-DGS 134

  Fly   243 PRGVAFVRYNKREEAQEAISAL--NNVIPEGGSQPLSVRLAE---EHGKAKAAHFMSQMGVV-PA 301
            .:|.|||:::...|||.||.||  :..:| |.|..|.|:.|:   |....:....:.|:|:: |:
  Rat   135 SKGCAFVKFSSHTEAQAAIHALHGSQTMP-GASSSLVVKFADTDKERTLRRMQQMVGQLGILTPS 198

  Fly   302 NVPPPPPQ----------------------------PPAHM---------------AAAFNMMHR 323
            ...|..|.                            ||.|:               .|..:.:|.
  Rat   199 LTLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFPPCHIQQIGTVSLNGLPATPIAPASGLHS 263

  Fly   324 ---------DGAMEKLRSLFDAI---------CDAIF--GL-----DSENFADLL----DGLYRR 359
                     .|.|..:.|.|..:         .:.::  ||     .|...|:.|    .|:.:.
  Rat   264 PPLLGTAAVPGLMTSIPSGFPGVLPFPGSHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQY 328

  Fly   360 KYHYPYLXLTP-----QQQQQLLQHQQQALGFTSSSNNSIGNGNGNDN-NMLLYH--QQYHQQQT 416
            ...||...:.|     .|...|||.|::                |.:. |:.:||  |::...:.
  Rat   329 TAMYPTAAIAPVAHSVPQPPHLLQQQRE----------------GPEGCNLFIYHLPQEFGDTEL 377

  Fly   417 QQQRL--GNVAAHNISPNGSNNNINTSNTNNINFNTIRQNGVAALHYLQ-----EQLQLQQPQD 473
            .|..|  ||:.:..:..:.:.|........:.:.....|..:.|::..|     .::||::|:|
  Rat   378 TQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDHPASAQAAIQAMNGFQIGMKRLKVQLKRPKD 441

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	22/83 (27%)
		RRM2_Hu_like	203..281	CDD:240822	25/79 (32%)
Celf5	XP_038934951.1	RRM1_CELF3_4_5_6	2..88	CDD:410041	22/81 (27%)
		PABP-1234	<9..358	CDD:130689	78/369 (21%)
		RRM2_CELF3_4_5_6	95..175	CDD:410043	26/81 (32%)
		RRM3_CELF3_4_5_6	357..435	CDD:241083	13/77 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910