Protein Alignment Sxl and ssx

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Alignment Length: 556
• Identity: 216/556 - (38%)
• Similarity: 255/556 - (45%)
• Gaps: 125/556 - (22%)

  Fly    22 NNKSSGGRGFGMSHSLPSGMDTEFSFPSSSSRRGYNDFPGCGGSGGNGGSANNLGGGNMCHLPPM 86
            :.:||...|.|.:.....|.|.:..  |:.:.:..|      |.|||||......|....|   .
  Fly    14 DEQSSDIEGSGDNVGRDDGTDDDDD--SNGNMQQEN------GDGGNGGDGQEHSGDEEQH---H 67

  Fly    87 ASNNSLNNLCGLSLGSGGSDDLMND-PRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMR 150
            :.:|..|:      .|.|....|.. .|.|.||||:|||||||||||||.||...||||||:|||
  Fly    68 SQDNEGND------NSAGQQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMR 126

  Fly   151 DYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTIT 215
            |:||||||||.|||:.:|.||:.||:.|||..|||||||||||||||:|||||||||.||.|.|.
  Fly   127 DFKTGYSFGYGFVDYKTESDSEDAIQKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNIN 191

  Fly   216 DDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRL 280
            ||.||.||..||.|||:|||||||||||||||||||||||||||||.||||.:|||||||:.|||
  Fly   192 DDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRL 256

  Fly   281 AEEHGKAKAAHFMSQM--------GVVPANVPPPPPQPPAHMAAAFNMMHRDGAMEKLRSLFDAI 337
            ||||||||||.||:|:        |..|...|..|..||.|    .|..|.:
  Fly   257 AEEHGKAKAAQFMAQIGGGNGGGGGGPPHMGPGGPMHPPHH----HNNHHHN------------- 304

  Fly   338 CDAIFGLDSENFADLLDGLYRRKYHYPYLXLTPQQQQQLLQHQQQALGFTSSSNNSIGNGNGNDN 402
                                  .:|.|::.....|.|...||.|
  Fly   305 ----------------------NHHNPHMPPHHHQPQHPHQHPQ--------------------- 326

  Fly   403 NMLLYHQQYHQQQTQQQRLGNVAAHNISPNGSNNNINTSNTNNINFNTIRQNGVAALHYLQEQLQ 467
                :|.|.|..|           |:...|.:||:.|..:.||.|.|.....|
  Fly   327 ----HHPQLHHMQ-----------HHHPNNHNNNHPNNHHHNNNNNNHHNMGG------------ 364

  Fly   468 LQQPQDQQSQQQQPLTMPSSPPFQQQSRQSHHNGSSSTLGNQLLAISNNNSFNNNSNQSNSFTGN 532
               |.....||..|:.|        ......:.|....:|..:.................:|...
  Fly   365 ---PHPHHMQQMHPMGM--------NMGMGVNMGMGMGMGMPIHGGGGGGGGGGGGGGGGNFHHM 418

  Fly   533 YSNGSAFTSNGAISGSNFPNNPTSSGNFTNNSTNSN 568
            ...|..|.....|. |.||:.|...||...:|.|.|
  Fly   419 AHRGEVFMLPLPIC-SRFPSQPHPVGNGICHSPNKN 453

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	61/79 (77%)
		RRM2_Hu_like	203..281	CDD:240822	62/77 (81%)
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	61/79 (77%)
		RRM_SF	179..257	CDD:302621	62/77 (81%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	67	1.000	Domainoid score	I3499
eggNOG	1	0.900	-	-		E33208_3BKYN
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	1	1.000	-	-		mtm1072
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24012
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	7	6.920