Protein Alignment Sxl and elav

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: NP_001245447.1
• Gene: elav / 31000
• FlyBaseID: FBgn0260400
• Length: 483
• Species: Drosophila melanogaster
• Alignment Length: 219
• Identity: 84/219 - (38%)
• Similarity: 128/219 - (58%)
• Gaps: 26/219 - (11%)

  Fly    84 PPMASNNSLNNL-CGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCR 147
            |..|..|:..|. .|...||.||.:       :.||||||||||.||:.|:.:||.::|.|.:.:
  Fly   122 PQQAQPNTNGNAGSGSQNGSNGSTE-------TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVK 179

  Fly   148 IMRDY-------------KTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGES 199
            ::||.             ..|.|.||.||::....|:::|:.||||:.::||.:|||:|||..::
  Fly   180 LIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDA 244

  Fly   200 IKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTG---RPRGVAFVRYNKREEAQEAI 261
            ||..||||:.||:|:|..:|:.||..:|:|:...||::  .|   :.:||.|:|::|||||..||
  Fly   245 IKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN--AGNDTQTKGVGFIRFDKREEATRAI 307

  Fly   262 SALNNVIPEGGSQPLSVRLAEEHG 285
            .|||...|...:.|:.|:.:...|
  Fly   308 IALNGTTPSSCTDPIVVKFSNTPG 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	39/92 (42%)
		RRM2_Hu_like	203..281	CDD:240822	33/80 (41%)
elav	NP_001245447.1	ELAV_HUD_SF	146..483	CDD:273741	75/195 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	76	1.000	Inparanoid score	I1646
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	1	1.000	-	-		mtm1072
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.960