DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sxl and RBM15B

DIOPT Version :9

Sequence 1:NP_001259303.1 Gene:Sxl / 3772180 FlyBaseID:FBgn0264270 Length:722 Species:Drosophila melanogaster
Sequence 2:NP_037418.3 Gene:RBM15B / 29890 HGNCID:24303 Length:890 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SxlNP_001259303.1 RRM1_SXL 117..197 CDD:241093
RRM2_Hu_like 203..281 CDD:240822
RBM15BNP_037418.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..133
RRM1_RBM15B 137..218 CDD:240998
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..253
RRM2_RBM15B 329..413 CDD:241000
RRM3_RBM15B 416..491 CDD:241002
RRM 529..>639 CDD:330708
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 547..705
Nuclear localization signal. /evidence=ECO:0000255 593..597
SPOC 712..887 CDD:311609
Interaction with Epstein-Barr virus BMLF1 722..890
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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