Protein Alignment Sxl and rbm-34

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: NP_502291.1
• Gene: rbm-34 / 178148
• WormBaseID: WBGene00008688
• Length: 394
• Species: Caenorhabditis elegans
• Alignment Length: 217
• Identity: 52/217 - (23%)
• Similarity: 94/217 - (43%)
• Gaps: 46/217 - (21%)

  Fly   110 NDPRASNT----NLIVNYLPQDMTDRELYALFRAIGPINTCRI--------------------MR 150
            ::.|||..    .:.|..:|..|.::.:..:|...|.|::.|:                    :.
 Worm   132 SNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHLTGKLN 196

  Fly   151 DYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGG---ESIKDTNLYVTNLPR 212
            |.::..:|   :|.|.:|...::|:| .||..:.:..::|.  :.|.   |..||..::|.|||.
 Worm   197 DKQSSLTF---YVKFGAEESVEKALK-YNGTKLDDHVIRVD--KVGSKKKEFGKDMAIFVGNLPF 255

  Fly   213 TITDDQLDTIF-GKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS-----------ALN 265
            .||:|.|.|.| .:.|.:....|:|||.||:.:|.|||.:.:......|:|           .:.
 Worm   256 EITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLALSMETIKMEKRDLRIT 320

  Fly   266 NVIPEGGSQPL-SVRLAEEHGK 286
            .|:.:|....: :.:....|||
 Worm   321 KVMKKGHLTKIQTAKKRTSHGK 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	17/103 (17%)
		RRM2_Hu_like	203..281	CDD:240822	25/90 (28%)
rbm-34	NP_502291.1	RRM1_RBM34	144..233	CDD:240840	16/92 (17%)
		RRM2_RBM34	247..320	CDD:240841	23/72 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910