Protein Alignment Sxl and rnp-4

DIOPT Version :9

• Sequence 1: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Sequence 2: NP_001369846.1
• Gene: rnp-4 / 175572
• WormBaseID: WBGene00004387
• Length: 142
• Species: Caenorhabditis elegans
• Alignment Length: 97
• Identity: 28/97 - (28%)
• Similarity: 47/97 - (48%)
• Gaps: 10/97 - (10%)

  Fly   180 GITVRNKRLKVSY--------ARPGG--ESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNI 234
            |:.....|.:::|        |..|.  .|::...::|||:....|:|.:...|.:||.|...::
 Worm    22 GLAQSRNRERITYDVVDEESSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHL 86

  Fly   235 LRDKLTGRPRGVAFVRYNKREEAQEAISALNN 266
            ..|:.||..:|.|.|.|..::||.|||...|:
 Worm    87 NLDRRTGFLKGYALVEYETQKEANEAIDQSND 118

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	4/24 (17%)
		RRM2_Hu_like	203..281	CDD:240822	22/64 (34%)
rnp-4	NP_001369846.1	RRM_RBM8	49..136	CDD:409762	23/70 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910