DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sxl and AgaP_AGAP009952

DIOPT Version :9

Sequence 1:NP_001259303.1 Gene:Sxl / 3772180 FlyBaseID:FBgn0264270 Length:722 Species:Drosophila melanogaster
Sequence 2:XP_319085.4 Gene:AgaP_AGAP009952 / 1279370 VectorBaseID:AGAP009952 Length:363 Species:Anopheles gambiae


Alignment Length:339 Identity:105/339 - (30%)
Similarity:167/339 - (49%) Gaps:58/339 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 NNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRD------ 151
            |.:.......||.:|       |.||||||||||.||..|:.:||.:||.:.:|:::||      
Mosquito    10 NGIADAQQNGGGQED-------SKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKPGCVT 67

  Fly   152 ----------------YKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESI 200
                            ..||.|.||.||::....|:.:||..|||:.::||::|||:|||..|:|
Mosquito    68 RHAHTHTYIHLFDGCYLLTGQSLGYGFVNYQRAEDASKAINTLNGLRLQNKQIKVSFARPSSEAI 132

  Fly   201 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALN 265
            |..||||:.||:.:....|:.:|..||.|:...||.|.:||..:||.|:|:::|.||::||..||
Mosquito   133 KGANLYVSGLPKNMLQADLEALFSPYGRIITSRILCDNITGLSKGVGFIRFDQRMEAEKAIKELN 197

  Fly   266 NVIPEGGSQPLSVRLAEEHGKAK-----AAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRDG 325
            ..:|:|.::|::|:.|......|     ||:...|   .....|.|...|....:|..|..:...
Mosquito   198 GTVPKGSTEPITVKFANNPSSTKTVPPLAAYLGPQ---AARRFPGPIHHPTGRFSAIPNYRYSPL 259

  Fly   326 AMEKLRSLF---DAI------CDAIFGLDSENFADLLDGLYRRKYHYPYLXLTPQQQQQLLQHQQ 381
            |.:.|.:..   :||      |..::.|..|...::|..|:.     |:. :   |..::::..|
Mosquito   260 AGDLLANSMIPTNAIANGSGWCIFVYNLAPETEENVLWQLFG-----PFGAV---QSVKVIKDLQ 316

  Fly   382 ----QALGFTSSSN 391
                :..||.:.:|
Mosquito   317 TNKCKGFGFVTMTN 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SxlNP_001259303.1 RRM1_SXL 117..197 CDD:241093 41/101 (41%)
RRM2_Hu_like 203..281 CDD:240822 31/77 (40%)
AgaP_AGAP009952XP_319085.4 ELAV_HUD_SF 24..361 CDD:273741 102/325 (31%)
RRM1_Hu 26..125 CDD:241094 38/98 (39%)
RRM2_Hu 135..213 CDD:241096 31/77 (40%)
RRM3_Hu 279..356 CDD:240823 11/60 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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