DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sxl and AgaP_AGAP009810

DIOPT Version :9

Sequence 1:NP_001259303.1 Gene:Sxl / 3772180 FlyBaseID:FBgn0264270 Length:722 Species:Drosophila melanogaster
Sequence 2:XP_318916.3 Gene:AgaP_AGAP009810 / 1279225 VectorBaseID:AGAP009810 Length:306 Species:Anopheles gambiae


Alignment Length:359 Identity:68/359 - (18%)
Similarity:124/359 - (34%) Gaps:121/359 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 LMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQ 172
            :.:|.|    .:.|..|.:::|::.:...|...|.:...::..||::....|:||::|.:..|:.
Mosquito     1 MTSDKR----TVYVGGLSEEVTEKLITDAFIPFGDLVDIQMPIDYESQKHRGFAFIEFENAEDAA 61

  Fly   173 RAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRD 237
            .|:..:|...:..:.::|:.|:|  :.||:.    :|.|....|:.|.    |:.....||   |
Mosquito    62 AAVDNMNDSELCGRTIRVNTAKP--QRIKEG----SNRPVWADDNWLQ----KHAGATLKN---D 113

  Fly   238 KLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMG----- 297
            ...|               |::.:....:.:     ||...:.|||..:.....|..::|     
Mosquito   114 GENG---------------AEQPMDTGTDEV-----QPKEPKAAEEKKRNPQVFFDIRIGNSDVG 158

  Fly   298 ----VVPANVPPPPPQPPAHMAAAFNMMHRDGAMEKLRSLFDAIC--DAIFGLDSENFADLLDGL 356
                |:.|:|.|                       |....|.|:|  :..||.....|..::.  
Mosquito   159 RIIMVLRADVVP-----------------------KTAENFRALCTGEQGFGYKGSTFHRIIP-- 198

  Fly   357 YRRKYHYPYLXLTPQQQQQLLQHQQQALGFTSSSNNSIGNGNGN---------DNNMLLYHQQYH 412
                                 :...|...||::      ||:|.         |.|.:|.|..: 
Mosquito   199 ---------------------EFMCQGGDFTAN------NGSGGKSIYGKKFADENFILKHTGF- 235

  Fly   413 QQQTQQQRLGNVAAHNISP--NGSNNNINTSNTN 444
                     |.::..|..|  |||...|.|..|:
Mosquito   236 ---------GVLSMANSGPNTNGSQFFICTEKTD 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SxlNP_001259303.1 RRM1_SXL 117..197 CDD:241093 17/79 (22%)
RRM2_Hu_like 203..281 CDD:240822 12/77 (16%)
AgaP_AGAP009810XP_318916.3 RRM <3..167 CDD:223796 39/200 (20%)
RRM_PPIE 8..80 CDD:240793 14/71 (20%)
cyclophilin_ABH_like 144..302 CDD:238907 32/179 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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