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Protein Alignment primo-1 and AT3G44620
DIOPT Version :9
Sequence 1: | NP_001027186.1 |
Gene: | primo-1 / 3772179 |
FlyBaseID: | FBgn0040077 |
Length: | 155 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001190010.1 |
Gene: | AT3G44620 / 823588 |
AraportID: | AT3G44620 |
Length: | 262 |
Species: | Arabidopsis thaliana |
Alignment Length: | 178 |
Identity: | 59/178 - (33%) |
Similarity: | 83/178 - (46%) |
Gaps: | 34/178 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 VLMICLGNICRSPIAEVVMVDTLEKANV-KDVEVDSAAIGGWHVGNRADPRAISTLQKHGLKCTH 68
||.:|||||||||.||.|..|.::|..: ....:|||....:|.||.||||..|..::.|::.|.
plant 79 VLFVCLGNICRSPAAEGVFRDIVKKRGLDSKFNIDSAGTIDYHEGNMADPRMRSAAKRRGIEITS 143
Fly 69 IVRQIRKQDFSEFDYIFGMDEDNMSELRR----------LAPKGSK----------AELLMLGDF 113
:.|.|:..||.|||.|..||:.|..::.: ..|...| .||.::..|
plant 144 LSRPIKASDFREFDLILAMDDQNKEDILKAYNVWKARGNFPPDADKKVPLVCVCWTLELYLVDRF 208
Fly 114 GLE----------KK--NRIIEDPYYERGAEGFETAYQQCVVACAAFM 149
.|. || ::.:.|||| .||:|||........||.:.:
plant 209 SLNFQVKLMCSYCKKHNDKFVPDPYY-GGAQGFEKVLDLLEDACESLL 255
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
primo-1 | NP_001027186.1 |
LMWPTP |
3..150 |
CDD:319971 |
59/178 (33%) |
AT3G44620 | NP_001190010.1 |
LMWPc |
77..256 |
CDD:238063 |
59/178 (33%) |
Information from Original Tools:
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