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Protein Alignment primo-1 and acp1
DIOPT Version :9
Sequence 1: | NP_001027186.1 |
Gene: | primo-1 / 3772179 |
FlyBaseID: | FBgn0040077 |
Length: | 155 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001005082.1 |
Gene: | acp1 / 448657 |
XenbaseID: | XB-GENE-973004 |
Length: | 157 |
Species: | Xenopus tropicalis |
Alignment Length: | 154 |
Identity: | 71/154 - (46%) |
Similarity: | 97/154 - (62%) |
Gaps: | 11/154 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 RKVLMICLGNICRSPIAEVVMVDTLEKANV-KDVEVDSAAIGGWHVGNRADPRAISTLQKHGLKC 66
:.||.:||||||||||||.|....:..|.. |:..:||||...|:||:..|.||:..|:.||::.
Frog 7 KSVLFVCLGNICRSPIAEAVFRKLVTDAGTSKEWSIDSAATSDWNVGSSPDSRALKCLKSHGIET 71
Fly 67 THIVRQIRKQDFSEFDYIFGMDEDNMSELRRLAPKG-----SKAELLMLGDFGLEKKNRIIEDPY 126
.|..:||.:.||..:|||..|||.|:.:|:| || |||::.:||.:..:|| .||||||
Frog 72 AHRAQQITRDDFLSYDYILCMDESNLRDLKR---KGSQVQNSKAKIELLGSYDPQKK-LIIEDPY 132
Fly 127 YERGAEGFETAYQQCVVACAAFMK 150
|.|. |.|||.||||:..|.:|::
Frog 133 YGRD-EDFETVYQQCIRCCKSFLE 155
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
primo-1 | NP_001027186.1 |
LMWPTP |
3..150 |
CDD:319971 |
71/152 (47%) |
acp1 | NP_001005082.1 |
LMWPTP |
7..155 |
CDD:319971 |
71/152 (47%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
124 |
1.000 |
Domainoid score |
I5444 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
125 |
1.000 |
Inparanoid score |
I4557 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001845 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm47992 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2237 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X1374 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 6.080 |
|
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