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Protein Alignment primo-1 and CG14297
DIOPT Version :9
Sequence 1: | NP_001027186.1 |
Gene: | primo-1 / 3772179 |
FlyBaseID: | FBgn0040077 |
Length: | 155 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_650756.1 |
Gene: | CG14297 / 42260 |
FlyBaseID: | FBgn0038655 |
Length: | 250 |
Species: | Drosophila melanogaster |
Alignment Length: | 146 |
Identity: | 51/146 - (34%) |
Similarity: | 75/146 - (51%) |
Gaps: | 4/146 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 RKVLMICLGNICRSPIAEVVMVDTLEKANVKDVEVDSAAIGGWHVGNRADPRAISTLQKHGLKCT 67
:|:|.:|:||.|.||:|||:|.:.:.|.::. .|||||.:..|:.|.|.:.|.:..|::|||:..
Fly 4 KKILFVCMGNSCSSPMAEVIMQNLMVKTSLY-WEVDSAGLRTWNTGRRPNKRCLQILREHGLRSD 67
Fly 68 HIVRQIRKQDFSEFDYIFGMDEDNMSELRRLAP---KGSKAELLMLGDFGLEKKNRIIEDPYYER 129
|..||....||..|||:..|||....||...|. .|...::|:|..||.......|:......
Fly 68 HFCRQFTVNDFLYFDYVVAMDEAVFKELLLWAADNRAGKHCQVLLLSSFGKNGLPAFIDSLSPTH 132
Fly 130 GAEGFETAYQQCVVAC 145
..:.|.:||.|....|
Fly 133 KLKNFRSAYYQIKECC 148
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
primo-1 | NP_001027186.1 |
LMWPTP |
3..150 |
CDD:319971 |
51/146 (35%) |
CG14297 | NP_650756.1 |
LMWPc |
4..152 |
CDD:238063 |
51/146 (35%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45446177 |
Domainoid |
1 |
1.000 |
64 |
1.000 |
Domainoid score |
I560 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0394 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
66 |
1.000 |
Inparanoid score |
I416 |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001845 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101411 |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11717 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
8 | 7.790 |
|
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