DRSC/TRiP Functional Genomics Resources

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Protein Alignment primo-1 and CG14903

DIOPT Version :10

Sequence 1:NP_001027186.1 Gene:primo-1 / 3772179 FlyBaseID:FBgn0040077 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_650561.1 Gene:CG14903 / 42014 FlyBaseID:FBgn0038446 Length:119 Species:Drosophila melanogaster


Alignment Length:132 Identity:28/132 - (21%)
Similarity:46/132 - (34%) Gaps:43/132 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VEVDSAAIGGWHVGNRADPRAISTLQKHGLKCTHIVRQIRKQDFSEFDYIFGMDEDNM------- 92
            |..|..:...|.:|      |:.....|   .|..|..:..:|.....|:  .|.|||       
  Fly    10 VRSDLRSALSWPLG------AVIAQSCH---ATAAVIHLNSEDADTVAYL--NDLDNMHKVVLEA 63

  Fly    93 ---SELRRLAPKGSKAELLMLGDFGLEKKNRI-IEDPYYERGAEGFETAYQQCVVACAAFMKERL 153
               |.|.:|:.|..:.|:          |::: ||.|      |...|.     :|...::|:.:
  Fly    64 KDESALVKLSEKLKENEI----------KHKLWIEQP------ENIPTC-----IALKPYVKDTV 107

  Fly   154 QK 155
            .|
  Fly   108 HK 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
primo-1NP_001027186.1 LMWPTP 3..150 CDD:319971 26/125 (21%)
CG14903NP_650561.1 PTH2_like 4..117 CDD:239107 28/132 (21%)

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