DRSC/TRiP Functional Genomics Resources

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Protein Alignment primo-1 and Acp1l1

DIOPT Version :10

Sequence 1:NP_001027186.1 Gene:primo-1 / 3772179 FlyBaseID:FBgn0040077 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_038956418.1 Gene:Acp1l1 / 302513 RGDID:1565965 Length:191 Species:Rattus norvegicus


Alignment Length:152 Identity:62/152 - (40%)
Similarity:89/152 - (58%) Gaps:5/152 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RKVLMICLGNICRSPIAEVVMVDTLEKANVKD-VEVDSAAIGGWHVGNRADPRAISTLQKHGLKC 66
            :.:|.:||||||||||||.|....:...||.| ..:||.|...:.|||..|.|....::|||:..
  Rat     7 KSMLFVCLGNICRSPIAEAVFRKLVIDENVSDNWRIDSVATSTYEVGNPPDYRGQHCVKKHGIHM 71

  Fly    67 THIVRQIRKQDFSEFDYIFGMDEDNMSELRRLA--PKGSKAELLMLGDFGLEKKNRIIEDPYYER 129
            .||..||.::||:.|:||..|||.|:.:|.|.:  .|..:|:..:||.:. .:|..|||||||..
  Rat    72 QHIALQIAREDFATFNYILCMDESNLRDLNRKSNQVKNCRAKTELLGSYD-PQKQLIIEDPYYGN 135

  Fly   130 GAEGFETAYQQCVVACAAFMKE 151
            .:: ||...||.:..|.||:::
  Rat   136 DSD-FEVVNQQYLRCCKAFLEK 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
primo-1NP_001027186.1 LMWPTP 3..150 CDD:319971 62/149 (42%)
Acp1l1XP_038956418.1 LMWPTP 7..155 CDD:319971 62/149 (42%)

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