DRSC/TRiP Functional Genomics Resources

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Protein Alignment primo-1 and Acp1

DIOPT Version :10

Sequence 1:NP_001027186.1 Gene:primo-1 / 3772179 FlyBaseID:FBgn0040077 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_067305.2 Gene:Acp1 / 11431 MGIID:87881 Length:158 Species:Mus musculus


Alignment Length:152 Identity:69/152 - (45%)
Similarity:94/152 - (61%) Gaps:5/152 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RKVLMICLGNICRSPIAEVVMVDTLEKANVKD-VEVDSAAIGGWHVGNRADPRAISTLQKHGLKC 66
            :.||.:||||||||||||.|....:....|.| ..:||||...:.|||..|.|..:.::|||:..
Mouse     7 KSVLFVCLGNICRSPIAEAVFRKLVTDEKVSDNWRIDSAATSTYEVGNPPDYRGQNCMRKHGIHM 71

  Fly    67 THIVRQIRKQDFSEFDYIFGMDEDNMSELRRLA--PKGSKAELLMLGDFGLEKKNRIIEDPYYER 129
            .||.|||.|:||:.||||..|||.|:.:|.|.:  .|..||::.:||.:. .:|..|||||||..
Mouse    72 QHIARQITKEDFATFDYILCMDESNLRDLNRKSNQVKNCKAKIELLGSYD-PQKQLIIEDPYYGN 135

  Fly   130 GAEGFETAYQQCVVACAAFMKE 151
            .:: ||..||||:..|.||:::
Mouse   136 DSD-FEVVYQQCLRCCKAFLEK 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
primo-1NP_001027186.1 LMWPTP 3..150 CDD:319971 69/149 (46%)
Acp1NP_067305.2 LMWPTP 7..155 CDD:319971 69/149 (46%)

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