DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex6 and AT1G62130

DIOPT Version :10

Sequence 1:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_176404.3 Gene:AT1G62130 / 842509 AraportID:AT1G62130 Length:1043 Species:Arabidopsis thaliana


Alignment Length:572 Identity:139/572 - (24%)
Similarity:238/572 - (41%) Gaps:141/572 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 ELGMHIYGADCAEIVSQVPSH-----TEMKLKAVFA----KSQVCEPLMICFHNFEIFGIDNEGN 441
            |:|   :|..|:....|..|.     .|:.:..:|.    :|:.| |::|...:.|.:.:.|.  
plant   516 EMG---HGFFCSATDLQFESSASDDLNELLVTKLFEVAHDQSRTC-PVIIFLKDAEKYFVGNS-- 574

  Fly   442 EDLRLLSAFHVQVQELFNRDRKHPIVVVALTSDRHL-KPMIQG------LFLEIINIDMPSKEER 499
               ...|||..:::.:.:.       ::.:.|..|. .|..:|      ||:..:.|.||..||.
plant   575 ---HFCSAFKSKLEVISDN-------LIVICSQTHSDNPKEKGIGRLTDLFVNKVTIYMPQGEEL 629

  Fly   500 FEILRWMHVRETFNDIIYNQKAIEQLPLFSRENQSQFMPRISPSWRETLNVLQDVAAKSQG---F 561
            .:  .|.:         :..:..|.|.:.:..|..:.             ||.....:.:|   .
plant   630 LK--SWKY---------HLDRDAETLKMKANYNHLRM-------------VLGRCGIECEGIETL 670

  Fly   562 LLGDLQLLYDNAVRM-------KIRNRLG-----RTTLDMSHF-----------AKNLTDM--QS 601
            .:.||.|..|:|.::       .|::..|     |..|.:...           .|:|.|:  ::
plant   671 CMKDLTLRRDSAEKIIGWALSHHIKSNPGADPDVRVILSLESLKCGIELLEIESKKSLKDIVTEN 735

  Fly   602 SFADS-LGAPKVPKVYWSDIGGLAKLKDEIQSSIGLPLKHVHLMGK-NLRR--SGILLYGPPGTG 662
            :|..| :..|....|.:.|||.|..:||.::..:.||.:...|..| .|.:  :||||:||.|||
plant   736 TFEISDIIPPSEIGVTFDDIGALENVKDTLKELVMLPFQWPELFCKGQLTKPCNGILLFGPSGTG 800

  Fly   663 KTLVAKAVATECNLSFLSVQGPELLNM----YVGQSEQNVREVFSRARSAAPCVLFLDELDSLAP 723
            ||::|||||||.        |..|:||    :..:.|:.|:.|||.|...:|.::||||::|:..
plant   801 KTMLAKAVATEA--------GANLINMSMSRWFSEGEKYVKAVFSLASKISPSIIFLDEVESMLH 857

  Fly   724 NRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFILAATNRPDLIDPALLRPGRFDKLFYVGP 788
            ...:         :..::.:...||:...:..: :.:|||||||..:|.|::|  |......|| 
plant   858 RYRL---------KTKNEFIINWDGLRTNEKER-VLVLAATNRPFDLDEAVIR--RLPHRLMVG- 909

  Fly   789 CSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRRTIDGHLSGT 853
            ...|..::.:|:....:..|....|::::|. :.:..||.||.::|..|   |.||.|:      
plant   910 LPDARSRSKILKVILSKEDLSPDFDIDEVAS-MTNGYSGNDLKNLCVTA---ARRRIIE------ 964

  Fly   854 ISEKELVPENVIVQE------------------EDFTKSFNKFVPSISAKDL 887
            |.|||....:..|.|                  |||..:......|||:|.:
plant   965 IVEKEKSERDAAVAEGRVPPAGSGGSDLRVLKMEDFRNALELVSMSISSKSV 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex6NP_001027403.2 SpoVK <367..600 CDD:440232 47/257 (18%)
RPT1 <609..883 CDD:440835 87/298 (29%)
AT1G62130NP_176404.3 FHA 93..193 CDD:469597
RPT1 705..1016 CDD:440835 97/341 (28%)
P-loop containing Nucleoside Triphosphate Hydrolases 754..908 CDD:476819 58/173 (34%)
Blue background indicates that the domain is not in the aligned region.

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