Protein Alignment Pex6 and PEX1

DIOPT Version :10

• Sequence 1: NP_001027403.2
• Gene: Pex6 / 3772165
• FlyBaseID: FBgn0033564
• Length: 899
• Species: Drosophila melanogaster
• Sequence 2: NP_196464.2
• Gene: PEX1 / 830746
• AraportID: AT5G08470
• Length: 1130
• Species: Arabidopsis thaliana
• Alignment Length: 737
• Identity: 198/737 - (26%)
• Similarity: 328/737 - (44%)
• Gaps: 159/737 - (21%)

  Fly   255 IEVNAELVGTATYAHYYL----IFAHL----------------RHVHLKCIHLETKGSE------ 293
            ::|::.:||..|:.|:.:    .:..:                :|..|:.:::.|...|
plant   441 VDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESGKKDKHTPLEILYVMTVSDESLLGDK 505

  Fly   294 ---FELQAIVAKNFSNLVQVPASHSFLPRQVLDSMAIVENYP----------------------- 332
               ::|....::...|:|.:        ..||:.|.:.|  |
plant   506 FAGYDLSLDRSEKSDNVVHI--------EPVLEKMNLGE--PIYLKSAKETHCNKGVSPDISSLT 560

  Fly   333 ------SGLRKPYKLLRSSVDAFLPKKSACLSSKHIFPVFLLQGERGSGKSKLVSAVA------Q 385
                  |.:.|...:|.|........|....|..||    |:.|..||||:.|..|.|      :
plant   561 WMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHI----LIYGPPGSGKTILARAAAKYFEEQK 621

  Fly   386 ELGMHIYGADCAEIVSQVPSHTEMKLKAVFAKSQVCEPLMICFHNFEIF---GIDNEGNE---DL 444
            :|..|:....|:.:..:...|....|.:|.|:.....|.:|...:.:..   ..|.||.:   .:
plant   622 DLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSVIILDDLDSIISSSSDTEGTQASVGV 686

  Fly   445 RLLSAFHVQVQELFNRDRKH-----PIVVVALTSDRHLKPMI---QGLFLEIINIDMPSKEERFE 501
            .:|:.|...|.:.:...|..     |:..||........|..   .|.|...:.:..|:..||..
plant   687 TMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGA 751

  Fly   502 ILRWMHVRETFNDIIYNQKAIEQLPLFSRENQSQFMPRISPSWRETLNVLQDVAAKSQGFLLGDL 566
            ||:                         .|.|.:.:..       :.::|.::|||.:|:...||
plant   752 ILK-------------------------HEIQKRLLDC-------SEDILLNLAAKCEGYDAYDL 784

  Fly   567 QLLYDNAV------RMKIRNRLGRTTLDMSHFAKNLTD-MQSSFAD-SLGAPKVPKVYWSDIGGL 623
            ::|.|.||      .:.:.:.:.:..|....|.:.:.| :..:..| :..|.:..::.|.|:||:
plant   785 EILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGV 849

  Fly   624 AKLKDEIQSSIGLPLKHVHLMGKN-LR-RSGILLYGPPGTGKTLVAKAVATECNLSFLSVQGPEL 686
            ..:|:.|:..|.||.|...:..|: || ||.:|||||||.|||.:..|.|..|:|.|:||:||||
plant   850 TDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPEL 914

  Fly   687 LNMYVGQSEQNVREVFSRARSAAPCVLFLDELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSD 751
            ||.|:|.|||.||::||:|.:||||:||.||.||:||.||  .|:.||.||||:|.|.|:||:
plant   915 LNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRG--HDNTGVTDRVVNQFLTELDGV-- 975

  Fly   752 GDTSKPIFILAATNRPDLIDPALLRPGRFDKLFYVGPCS--TAEDKAAVLRAQTQRFALDAGVDM 814
             :....:|:.|||:||||:|||||||||.|:|..   |.  :..::..:|...:::..:...:|:
plant   976 -EVLTGVFVFAATSRPDLLDPALLRPGRLDRLLL---CDFPSPPERLEILTVLSRKLLMADDIDL 1036

  Fly   815 EQIAERLKSE-MSGADLYSICSNAWLSAVRRTIDGHLSGTISEKELVPE---NVIVQEEDFTKSF 875
            |.||  |.:| .|||||.::.|:|.|:||...::         :|..||   ..|:.:.......
plant  1037 EPIA--LMTEGFSGADLQALLSDAQLAAVHEYLN---------REDKPETGTTPIITDPLLKSIA 1090

  Fly   876 NKFVPSISAKDLEYFNNLKASY 897
            :|..||:|..:.:...::.:.:
plant  1091 SKTKPSVSETEKQKLYDIYSQF 1112

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pex6	NP_001027403.2	SpoVK	<367..600	CDD:440232	52/259 (20%)
		RPT1	<609..883	CDD:440835	119/281 (42%)
PEX1	NP_196464.2	PEX-1N	109..182	CDD:462729
		CDC48	<585..1117	CDD:273521	177/583 (30%)
		RecA-like_PEX1_r2	852..1009	CDD:410934	89/164 (54%)