Protein Alignment Pex6 and CDC48C

DIOPT Version :10

• Sequence 1: NP_001027403.2
• Gene: Pex6 / 3772165
• FlyBaseID: FBgn0033564
• Length: 899
• Species: Drosophila melanogaster
• Sequence 2: NP_001326134.1
• Gene: CDC48C / 821105
• AraportID: AT3G01610
• Length: 830
• Species: Arabidopsis thaliana
• Alignment Length: 649
• Identity: 180/649 - (27%)
• Similarity: 298/649 - (45%)
• Gaps: 123/649 - (18%)

  Fly   289 TKGSEFELQAIVAKNFSNLVQVPASHSFLPRQVLDSMAIVENYPSGLRKPYKLLRSSVDAFLPKK 353
            |||..|       |:|..:           :::||.:.:...:|....:|:|.:     ...|..
plant   227 TKGPTF-------KDFGGI-----------KKILDELEMNVLFPILNPEPFKKI-----GVKPPS 268

  Fly   354 SACLSSKHIFPVFLLQGERGSGKSKLVSAVAQELGMHIYGADCAEIVSQVPSHTEMKLKAVFAKS 418
            .           .|..|..|.||:||.:|:|.|.|:..|.....|::|.|...:|..::.:|:|:
plant   269 G-----------ILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKA 322

  Fly   419 QVCEPLMICFHNFEIFGIDNEGNE---DLRLLSAFHVQVQELFNR-DRKHP-------IVVVALT 472
            ....|.::.....:..|...|..:   :.|:::.....:....|: |:..|       :|:.|..
plant   323 YRTAPSIVFIDEIDAIGSKRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATN 387

  Fly   473 SDRHLKPMIQ--GLFLEIINIDMPSKEERFEILRWMHVRETFNDIIYNQKAIEQLPLFSRENQSQ 535
            ....|.|.::  |.|...|.:..|.::.|.|||.           :..||...:.| |.::.
plant   388 RPDALDPALRRSGRFETEIALTAPDEDARAEILS-----------VVAQKLRLEGP-FDKKR--- 437

  Fly   536 FMPRISPSWRETLNVLQDVAAKSQGFLLGDLQLLYDNAVRMKIR--------------------- 579
             :.|::|                 ||:..||:.:...|.|..|:
plant   438 -IARLTP-----------------GFVGADLESVAYLAGRKAIKRILDSRKSEQSGDGEDDKSWL 484

  Fly   580 ------NRLGRTTLDMSHFAKNLTDMQSSFADSLGAPKVPKVYWSDIGGLAKLKDEIQSSIGLPL 638
                  ..|.:..:.||.|.:.:..:|:|.... |...||.|.|.|:|||..|:.:....|..|:
plant   485 RMPWPEEELEKLFVKMSDFEEAVNLVQASLTRE-GFSIVPDVKWDDVGGLDHLRLQFNRYIVRPI 548

  Fly   639 KHVHL---MGKNLRRSGILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVRE 700
            |...:   .|.:| .:|.|||||||.||||:|||.|.|...:|:.::|.||||.|||:||..:|.
plant   549 KKPDIYKAFGVDL-ETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRT 612

  Fly   701 VFSRARSAAPCVLFLDELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFILAATN 765
            :|.|||:.||||:|.||:|:|..:||..|  ..|::|:::|.|.|:||   |: .:.::::.|||
plant   613 LFQRARTCAPCVIFFDEVDALTTSRGKEG--AWVVERLLNQFLVELDG---GE-RRNVYVIGATN 671

  Fly   766 RPDLIDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGADL 830
            |||::|||.||||||..|.|| |...|:::|::|:|..::..:|..||::.||:......|||||
plant   672 RPDVVDPAFLRPGRFGNLLYV-PLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADL 735

  Fly   831 YSICSNAWLSAVRRTIDGHLSGTISEKELVP-ENVIVQEEDFTKSFNKFVPSISAKDLEYFNNL 893
            ..:...|...||...|.   |...||.::.. ....::...|.::.:...||::.:...:::.|
plant   736 AHLVQKATFQAVEEMIG---SSESSEDDVTDITQCTIKTRHFEQALSLVSPSVNKQQRRHYDAL 796

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pex6	NP_001027403.2	SpoVK	<367..600	CDD:440232	54/272 (20%)
		RPT1	<609..883	CDD:440835	110/277 (40%)
CDC48C	NP_001326134.1	CDC48	<223..808	CDD:273521	180/649 (28%)