DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex6 and pex6

DIOPT Version :10

Sequence 1:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster
Sequence 2:XP_001332652.6 Gene:pex6 / 792998 ZFINID:ZDB-GENE-081104-252 Length:1071 Species:Danio rerio


Alignment Length:754 Identity:260/754 - (34%)
Similarity:392/754 - (51%) Gaps:115/754 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 IRSNCWVQVEHFADEQ--------TIPGIATKAHVYLVADPHELPAELTEVILSNYFNTPRLMHR 249
            |:...|.:.....|.|        :.|..|.:.|:..:..|......|...:|..:|:.|||:.:
Zfish   383 IKIKRWNKASSHTDPQVSASACRCSSPPFAKELHIETIISPDYSALGLFSSVLHTHFSKPRLVQQ 447

  Fly   250 GHTYRI--EVNAELV--GTATYAHYYLIFAHLRHVHLKCIHLETKGSEFELQAIVA-KNFSNLVQ 309
            |:...:  :.:.||:  |:.....:.:::..::..   |   .....|.|..:.:| .:.::|..
Zfish   448 GNILAVPTQGHPELMENGSEGVLRWPVLYFRVKQA---C---GFSSEEEEASSYLADSSHTSLYM 506

  Fly   310 VPASHSFLPRQVLD--SMAIVENYPSGLRKPYKLLRSSVDAFLPK-----KSACLSSKHIFPVFL 367
            ..::||..|..||.  |...:...|.||....:.|.:.:...|.:     |..|        ..|
Zfish   507 GGSAHSLCPYSVLPEASSFWISLSPPGLSSTVEKLITIIQPHLNESTLILKRGC--------SIL 563

  Fly   368 LQGERGSGKSKLVSAVAQELGMHIYGADCAEIVSQVPSHTEMKLKAVFAKSQVCEPLMICFHNFE 432
            |.|..||||...|.||::.|.:|:...||..:.:...:.:|.|:|:||.::::..|.::...|.:
Zfish   564 LMGPNGSGKFTAVRAVSRRLHLHLIKVDCVTLCADTAAASEAKIKSVFERAELHHPCLLLLRNLQ 628

  Fly   433 IFGIDNEGNE-DLR-------LLSAFHVQVQELFNRDRKHPIVVVALTSDRHLKPMIQGLFLEII 489
            :.|...:|.| |.|       |::|.|..|           :||.:::|...|...:...|:..:
Zfish   629 LLGQSRDGAETDCRVAATLCQLIAAVHTSV-----------VVVGSVSSQHELPSDVMAAFVHQV 682

  Fly   490 NIDMPSKEERFEILRWMHVRETFNDIIYNQKAIEQLPLFSRENQSQFMPRISPSWRETLNVLQDV 554
            .|:..|:::|..:|               ....|.|.|....|                  |..:
Zfish   683 AIESLSEDQRRTVL---------------SSLSEDLLLGKDVN------------------LGRI 714

  Fly   555 AAKSQGFLLGDLQLLYDNAVRMKIRNRLGRT-------------------TLDMSHFAKNLTDMQ 600
            |.::.||:||||..|..||.:...| ||..|                   ::....|:..|..:|
Zfish   715 AKQTAGFVLGDLCALLTNAGKAAHR-RLVETYFPEAVSEQEEEDLCVSGVSVTSEDFSAALDVLQ 778

  Fly   601 SSFADSLGAPKVPKVYWSDIGGLAKLKDEIQSSIGLPLKHVHLMGKNLRRSGILLYGPPGTGKTL 665
            .:.:.::||||:|.|.|.|:|||.::|.||..:|.|||:|..|:...|||||:||||||||||||
Zfish   779 EAHSQAIGAPKIPAVSWQDVGGLQQVKKEILDTIQLPLEHPELLSLGLRRSGLLLYGPPGTGKTL 843

  Fly   666 VAKAVATECNLSFLSVQGPELLNMYVGQSEQNVREVFSRARSAAPCVLFLDELDSLAPNRGVAGD 730
            :||||||||.::||||:||||:||||||||:|:|:|||:|||||||::|.|||||||||||.:||
Zfish   844 LAKAVATECTMTFLSVKGPELINMYVGQSEENIRQVFSKARSAAPCIIFFDELDSLAPNRGHSGD 908

  Fly   731 SGGVMDRVVSQLLAEMDGM-SDGDTSKPIFILAATNRPDLIDPALLRPGRFDKLFYVGPCSTAED 794
            |||||||||||||||:||: |.||    :|::.|||||||:|.:||||||||||.|||.....|.
Zfish   909 SGGVMDRVVSQLLAELDGLHSSGD----VFVIGATNRPDLLDQSLLRPGRFDKLVYVGINEDRES 969

  Fly   795 KAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRRTIDGHLSGTISEKEL 859
            :..||:|..::|.:||.|.:..|.|.....::||||||:||:|.:.||:|.|.....|..||.  
Zfish   970 QLQVLKAILRKFKVDASVCLSDIVESCPPRLTGADLYSLCSDAMMCAVKRKISRITEGVDSEL-- 1032

  Fly   860 VPENVIVQEEDFTKSFNKFVPSISAKDLEYFNNLKASYS 898
              .::.:..|||:::.:...||:|.:.:..:..|:...|
Zfish  1033 --SSLTLCSEDFSEALSGLQPSVSEQQISRYQLLQQKLS 1069

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex6NP_001027403.2 SpoVK <367..600 CDD:440232 60/259 (23%)
RPT1 <609..883 CDD:440835 159/274 (58%)
pex6XP_001332652.6 None

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