DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex6 and spata5l1

DIOPT Version :9

Sequence 1:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001070056.2 Gene:spata5l1 / 767648 ZFINID:ZDB-GENE-060929-204 Length:748 Species:Danio rerio


Alignment Length:855 Identity:214/855 - (25%)
Similarity:350/855 - (40%) Gaps:214/855 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 RRVRIGKPLASDEG-NMTQTVIKQMLQEA----------------------------PHTIVAQI 166
            :|.|:|..|.|..| .:...|:.::||..                            .||:.|..
Zfish    17 QRCRMGPALMSSLGLRLGSPVLIRVLQGTCLCTAWPRRDLADGYLQISSQCVSPDLHKHTLTALT 81

  Fly   167 LPAAQCQP-NCLYVQENFYGNILDRFQIRSNCWVQVEHFADEQTIPGIATKAHVYLVADPHELPA 230
            :..||.:| .||                :..| |:::.|        :....|...|::     .
Zfish    82 VHPAQIKPLTCL----------------KLTC-VKLKVF--------VQRLEHKKRVSE-----R 116

  Fly   231 ELTEVILSNYFNTPRLMHRGHT-----YRIEVNAELVGTATYAHYY--LIFAHLRHVHLKCIHLE 288
            .|.|::...|      :|.||.     .:.|:...||.........  ||.|.      .|:.:.
Zfish   117 SLQELLDGIY------VHEGHLVDLSGVKAEIRCVLVEKVNSGSQRAGLITAR------TCVDIS 169

  Fly   289 T----KGSEFELQAIVAKNFSNLVQVPASHSFLPRQVLDSMAIVENYPSGLRKPYKLLRSSVDAF 349
            |    |..:.:.|.:.|.....:..|.||       :.:.:.....||..||:        :...
Zfish   170 TIQTVKHLDRQQQQVSAAPLGGMEDVFAS-------LKEMITFPLRYPGSLRQ--------LGLS 219

  Fly   350 LPKKSACLSSKHIFPVFLLQGERGSGKSKLVSAVAQELGMHIYGADCAEIVSQVPSHTEMKLKAV 414
            .|:.            .||.|..|.||:.||..||:::|..:...:..|:....|..:|..|:.|
Zfish   220 CPRG------------LLLIGPPGVGKTLLVRCVAKDIGATLVTVNGPEVTGSRPGESEENLRRV 272

  Fly   415 FAKSQVCE---PLMICFHNFEIFGIDNEGNE---DLRLLSAFHVQVQELFNRDRKHP--IVVVAL 471
            |.:::...   |.::.....:.......|:.   :.||::    |:..|.:....|.  :::.|.
Zfish   273 FEQARDAADDGPCVLLIDEIDSLCPRRTGSSSAPENRLVA----QLLTLMDAIGSHEGFVIIGAT 333

  Fly   472 TSDRHLKPMIQ--GLFLEIINIDMPSKEERFEILRWMHVRETFNDIIYNQKAIEQLPLFSRENQS 534
            .....|.|.::  |.|...:.|.:||..:|..||:.:               ..::||       
Zfish   334 NQPDSLDPALRRPGRFDREVIIGVPSLLQRRSILKCV---------------CREMPL------- 376

  Fly   535 QFMPRISPSWRETLNVLQDVAAKSQGFLLGDLQLLYDNAVRMKIR-NRLGRT-TLDMSHFAKNLT 597
                  ||.  ..||.|.::..   |::..||..|...|....:| :::|.: .:.|.||.:.|.
Zfish   377 ------SPD--VDLNTLAEMTC---GYVGADLSALSREAALQAMRHSQMGASEPVSMQHFMQALR 430

  Fly   598 DMQ-SSFADSLGAPKVPKVYWSDIGGLAKLKDEIQSSIGLPLKHVHL---MGKNLRRSGILLYGP 658
            .:| |....|:||.....:.|..||||..:|.:::.||..|::....   :|.: |..|:|||||
Zfish   431 HVQPSCLRSSIGATDFKPIGWEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVS-RPRGVLLYGP 494

  Fly   659 PGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVREVFSRARSAAPCVLFLDELDSLAP 723
            ||..||.:.||.|:..:.||.|:.|.||.:.|||.||:.:.::|::||:.||.::||||:||:..
Zfish   495 PGCAKTTLVKAAASSSHCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDSMVG 559

  Fly   724 NR-GVAGDSGGVMDRVVSQLLAEMDG-----------------MSDGD--------------TSK 756
            :| ..:..|..|..:|:|.||.|:||                 :..||              .:|
Zfish   560 SREDGSSSSHSVQSQVLSVLLTELDGVGVRTLERRSTCRKIALLEGGDQEDVRLHQMELQEVCNK 624

  Fly   757 PIFILAATNRPDLIDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDMEQIAERL 821
            .:.|:||||||:.:|.|||||||.|::.||.| ...:.:.||||..|:...|...|.:|.:|.:.
Zfish   625 DVLIVAATNRPEALDSALLRPGRLDQIIYVPP-PDLQARLAVLRICTKSVPLHQDVCLEDLAAQT 688

  Fly   822 KSEMSGADLYSICSNAWLSAVRRTIDGHLSGTISEKELVPENVIVQEEDFTKSFNKFVPSISAKD 886
            :. .|||||.::|..|.|.|:|.  ||.....:.:|.            |.|:.....||:||:.
Zfish   689 EL-FSGADLENLCKEAALLALRE--DGLAVSCVRQKY------------FLKALQMLSPSLSAEQ 738

  Fly   887 LEYFNNLKAS 896
            |:  .|:.|:
Zfish   739 LQ--QNIHAA 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex6NP_001027403.2 SpoVK 367..847 CDD:223540 155/527 (29%)
P-loop_NTPase 367..492 CDD:304359 29/134 (22%)
AAA 653..787 CDD:278434 64/165 (39%)
spata5l1NP_001070056.2 CDC48 13..740 CDD:273521 211/845 (25%)
AAA 224..357 CDD:278434 30/136 (22%)
AAA 489..655 CDD:278434 64/165 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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