DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex6 and Pex1

DIOPT Version :9

Sequence 1:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001280735.1 Gene:Pex1 / 71382 MGIID:1918632 Length:1284 Species:Mus musculus


Alignment Length:757 Identity:213/757 - (28%)
Similarity:338/757 - (44%) Gaps:174/757 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 QTIPGIATKAHVYLVADPHE-LPAELTEVILSNYFNT----------PRLMHRGHTYRIEVNAEL 261
            :|.|.|...    |...|.| ||.::.|..:...|::          |.::.:....::|:.   
Mouse   435 ETTPKIPRS----LKLQPRENLPKDVNEETIKTVFSSWVQQSATTMLPLVISKEERIKLEIK--- 492

  Fly   262 VGTATYAHYYLIFAHLRHVHLKCIHLETKGSE-----FELQAIVAKNFSNLVQVPASHSFLPRQV 321
                         ..||...|..:|.:.|..|     |.|.:|:.:..|  |||          :
Mouse   493 -------------DGLREFSLSTVHSQEKEKEEGKTVFVLSSILLQKIS--VQV----------L 532

  Fly   322 LDSMAIVENYPSGLRKPYKLLRSSVDAFLPKKSACLSS------------KHIF------PV--- 365
            |:.|...|.            .:.:|..||  |..|||            :||.      |:   
Mouse   533 LEPMIKEEQ------------SAEIDFLLP--SLTLSSLGGVSALGASAMEHITHSLLGRPLSRQ 583

  Fly   366 ------------FLLQGERGSGKSKLVSAVAQE----LGMHIYGADCAEIVSQVPSHTEMKLKAV 414
                        .|:.|.:|||||....|:.:|    |...:...||..:..:.....:..|:..
Mouse   584 LMALVAGLRNGALLITGGKGSGKSTFAKAICKEAQDTLDARVETVDCKALRGKRLESIQKALEVA 648

  Fly   415 FAKSQVCEPLMICFHNFE-IFGIDN--------EGNEDLRLLSAFHVQVQELFNRDRKHPIVVVA 470
            |:::...:|.:|...:.: |.|:.:        |..:..||..|.:..::|..:..   .:|.:.
Mouse   649 FSEAAWRQPSVILLDDLDLIAGLPSVPEQEHSPEAVQSQRLAHALNDMIKEFVSTG---SLVALI 710

  Fly   471 LTS--DRHLKPMI---QGL--FLEIINIDMPSKEERFEILRWMHVRETFNDIIYNQKAIEQLPLF 528
            .||  .:.|.|.:   ||:  |..:.::..|:.|:|.|||         :.::.|:...:     
Mouse   711 ATSQLQQSLHPSLVSAQGIHTFQCVQHLQPPNPEQRCEIL---------HSVVKNKLGCD----- 761

  Fly   529 SRENQSQFMPRISPSWRETLNVLQDVAAKSQGFLLGDLQLLYDNAVRMKIRNRLGRT----TLDM 589
                .|.| |.:.         ||.:|..::.|:..|..:|.|.|:...:..:...:    ||..
Mouse   762 ----ISNF-PDLD---------LQCIAKDTEAFVARDFTVLVDRAIHSSLSRQHSSSREDLTLTT 812

  Fly   590 SHFAKNLTDMQSSFADSLGAPKVPKVYWSDIGGLAKLKDEIQSSIGLPLKHVHLMGKNL---RRS 651
            |.|.|.|.....:...::...|...:.|..||||.:::..:..:|.||.|:..|.. ||   :|:
Mouse   813 SDFQKALRGFLPASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFA-NLPIRQRT 876

  Fly   652 GILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVREVFSRARSAAPCVLFLD 716
            ||||||||||||||:|..||.|..::|:|::|||||:.|:|.|||.||:||.||::|.||:||.|
Mouse   877 GILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFD 941

  Fly   717 ELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFILAATNRPDLIDPALLRPGRFD 781
            |.:|:||.||  .|:.||.||||:|||.::||:   :..:.:::||||:||||||||||||||.|
Mouse   942 EFESIAPRRG--HDNTGVTDRVVNQLLTQLDGV---EGLQGVYVLAATSRPDLIDPALLRPGRLD 1001

  Fly   782 KLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRRTI 846
            |..|..|.... .:..:|...::..||...||::.:|. :....:||||.::..||.|.|    :
Mouse  1002 KCVYCPPPDQV-SRLEILTVLSKSLALADDVDLQHVAS-VTDSFTGADLKALLYNAQLEA----L 1060

  Fly   847 DGHL--SGTISEKELVPENVIVQEEDFTKSFNKFVPSISAKD 886
            .|.|  ||       :|:.....:.|.:.|...|:...|..|
Mouse  1061 QGRLLPSG-------LPDGGSSSDSDLSLSSMVFLNHSSGSD 1095

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex6NP_001027403.2 SpoVK 367..847 CDD:223540 165/506 (33%)
P-loop_NTPase 367..492 CDD:304359 31/144 (22%)
AAA 653..787 CDD:278434 80/133 (60%)
Pex1NP_001280735.1 PEX-2N 19..98 CDD:286362
PEX-1N 104..179 CDD:286361
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 339..373
AAA 592..742 CDD:214640 31/152 (20%)
AAA 596..725 CDD:278434 28/131 (21%)
AAA 878..1010 CDD:214640 81/136 (60%)
AAA 878..1007 CDD:278434 80/133 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1261..1284
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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