DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex6 and Atad2

DIOPT Version :10

Sequence 1:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_081711.2 Gene:Atad2 / 70472 MGIID:1917722 Length:1364 Species:Mus musculus


Alignment Length:366 Identity:117/366 - (31%)
Similarity:182/366 - (49%) Gaps:65/366 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   529 SRENQSQFMPRISPSWRETLNVLQDVAAKSQGFLLGDLQLLYDNAVRMKIRNRLGRTTLDMSHFA 593
            ::.|:::.:.|..|     ||..:|           :::.:|.:  ||||              .
Mouse   355 TKRNRNRAINRCLP-----LNFRKD-----------EIRGIYKD--RMKI--------------G 387

  Fly   594 KNLTDMQSSFADSLGAPKVPKVYWSDIGGLAKLKDEIQSSIGLPLKHVHLMGKNLRR--SGILLY 656
            .:|.|:.....|:       .|.:..:|||:.....::..:..||.:..:..|...:  .|.|.|
Mouse   388 ASLADVDPMQLDT-------SVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFY 445

  Fly   657 GPPGTGKTLVAKAVATECN-----LSFLSVQGPELLNMYVGQSEQNVREVFSRARSAAPCVLFLD 716
            |||||||||||:|:|.||:     ::|...:|.:.|:.:||:||:.:|.:|.:|....|.::|.|
Mouse   446 GPPGTGKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFD 510

  Fly   717 ELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFILAATNRPDLIDPALLRPGRFD 781
            |:|.|||.|....|.  :...:||.|||.|||:   |:...|.::.||||.|.|||||.||||||
Mouse   511 EIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGL---DSRGEIVVIGATNRLDSIDPALRRPGRFD 570

  Fly   782 KLFYVGPCSTAEDKAA---VLRAQTQRFALDAGVDM--EQIAERLKSEMSGADLYSICSNAWLSA 841
            :.|..    :..||.|   :|:..|:.:. ...|||  |::||.... ..|||:.|||:.|.|.|
Mouse   571 REFLF----SLPDKNARKEILKIHTRDWN-PKPVDMFLEELAEHCVG-YCGADIKSICAEAALCA 629

  Fly   842 VRRTIDGHLSGTISEK-ELVPENVIVQEEDFTKSFNKFVPS 881
            :||......  |.||| :|...::.:..:||..:..|..|:
Mouse   630 LRRRYPQIY--TTSEKLQLDLSSITISAKDFEAALQKIRPA 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex6NP_001027403.2 SpoVK <367..600 CDD:440232 13/70 (19%)
RPT1 <609..883 CDD:440835 103/286 (36%)
Atad2NP_081711.2 RecA-like_Yta7-like 406..575 CDD:410925 71/173 (41%)
AAA_lid_3 603..637 CDD:465537 14/34 (41%)
ycf46 <766..907 CDD:177094
Bromo_AAA 960..1070 CDD:99957
Blue background indicates that the domain is not in the aligned region.

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