DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex6 and Afg2a

DIOPT Version :10

Sequence 1:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001156983.1 Gene:Afg2a / 57815 MGIID:1927170 Length:893 Species:Mus musculus


Alignment Length:112 Identity:25/112 - (22%)
Similarity:44/112 - (39%) Gaps:19/112 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DSLQARLDAITFPERYKGTILEKWAMYWKNLVIDYKE----MVIDTGRTMRDRPVRSSVYVSLLA 89
            ||||.:|..:    ..:..:|...|.:.:...|.|:|    :|.|..:.:||..::.|.....||
Mouse   182 DSLQKKLKDL----EEENIVLRSEANHLETETISYEEKEQQLVNDCVKELRDANIQISTIAEELA 242

  Fly    90 GSLYAGARNPSE-----TDFYDQFRRAYNQLSLVHPTCQNPIASQHL 131
            ......:|...|     :...|..::|.:.      ..:|...:|||
Mouse   243 KKTEDASRQQEEITHLLSQIVDLQKKAKSY------ALENEELTQHL 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex6NP_001027403.2 SpoVK <367..600 CDD:440232
RPT1 <609..883 CDD:440835
Afg2aNP_001156983.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38
CDC48_N 64..132 CDD:451359
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..227 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 239..315 10/51 (20%)
CDC48 <323..889 CDD:273521
Blue background indicates that the domain is not in the aligned region.

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