DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex6 and zgc:136908

DIOPT Version :10

Sequence 1:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001035017.1 Gene:zgc:136908 / 563679 ZFINID:ZDB-GENE-060312-22 Length:805 Species:Danio rerio


Alignment Length:875 Identity:237/875 - (27%)
Similarity:380/875 - (43%) Gaps:212/875 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 PNRLYDLLIKNE--------QIKSEHL-VFASQEVYENYAESPDVNFVNLVIRGRRVRIGKPLAS 141
            ||||......||        |:|.|.| :|....|               |:|||:.|       
Zfish    25 PNRLIVDEATNEDNSIVCLSQVKMEELQLFRGDTV---------------VLRGRKRR------- 67

  Fly   142 DEGNMTQTVIKQMLQEAPHTIVAQILPAAQCQPNCLYVQENFYGNILDRFQI----RSNCWVQVE 202
                  |||                         |:.:.::..||  :|.::    |:|..|::.
Zfish    68 ------QTV-------------------------CIVLTDDTCGN--ERVRMNRVTRNNLRVRLG 99

  Fly   203 HFADEQTIPGI--ATKAHVYLVADPHE-LPAELTEVILSNYF-NTPRLMHRGHTYRIE-----VN 258
            ........|.:  ..:.||..:.|..| |...|.:|.|..|| ...|.:|:|..:.:.     |.
Zfish   100 DVISIHPCPDVKYGKRIHVLPIDDTIEGLTGNLFDVFLKPYFLEAYRPVHKGDIFLVRGGMRAVE 164

  Fly   259 AELVGTATYAHYYLIFAHLRHVHLKCIHLETKGSEFELQAI----------VAKNFSNLVQVPAS 313
            .::|.|....|  .|.|....:|.:...::.:..|..|..|          .......:|::|..
Zfish   165 FKVVETDPTPH--CIVAPDTIIHCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLR 227

  Fly   314 HSFLPRQVLDSMAIVENYPSGLRKPYKLLRSSVDAFLPKKSACLSSKHIFPVFLLQGERGSGKSK 378
            |..|.:.:            |::.|..:                         ||.|..|:||:.
Zfish   228 HPALFKAI------------GVKPPRGI-------------------------LLYGPPGTGKTL 255

  Fly   379 LVSAVAQELGMHIYGADCAEIVSQVPSHTEMKLKAVFAKSQVCEPLMICFHNFEIFGIDNE---G 440
            :..|||.|.|...:..:..||:|::...:|..|:..|.:::...|.:|.....:......|   |
Zfish   256 VARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG 320

  Fly   441 NEDLRLLSAFHVQVQELFNRDRKHPIVVVALTSDRHLKPMIQ--GLFLEIINIDMPSKEERFEIL 503
            ..:.|::|.....:..|  :.|.|.:|:.|......:...::  |.|...|:|.:|....|.|||
Zfish   321 EVERRIVSQLLTLMDGL--KQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLEIL 383

  Fly   504 RWMHVRETFNDIIYNQKAIEQLPLFSRENQSQFMPRISPSWRETLNVLQDVAAKSQGFLLGDLQL 568
            : :|.:        |.|..|.:.                        |:.::|::.|.:..||..
Zfish   384 Q-IHTK--------NMKLSEDVD------------------------LEQISAETHGHVGADLAA 415

  Fly   569 LYDNAVRMKIRNRLGRTTLD----------MSHFAKNLTDMQSSFADSLGAP------KVPKVYW 617
            |...|....||.::  |.:|          ::..|..:.|.:.:.:.|..:.      :||.|.|
Zfish   416 LCSEAALQAIRKKM--TLIDLEDDSIDADLLNSLAVTMDDFKWALSQSNPSALRETVVEVPHVNW 478

  Fly   618 SDIGGLAKLKDEIQSSIGLPLKHVHLMGKNLR-----RSGILLYGPPGTGKTLVAKAVATECNLS 677
            .|||||.::|.|:|..:..|:::   ..|.|:     ..|:|.|||||.||||:|||:|.||..:
Zfish   479 EDIGGLDEVKRELQELVQYPVEY---PDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN 540

  Fly   678 FLSVQGPELLNMYVGQSEQNVREVFSRARSAAPCVLFLDELDSLAPNR-GVAGDSGGVMDRVVSQ 741
            |:|::|||||.|:.|:||.|||:||.:||.||||:||.|||||:|..| |.|||:||..|||::|
Zfish   541 FVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDAGGAADRVINQ 605

  Fly   742 LLAEMDGMSDGDTSKPIFILAATNRPDLIDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQRF 806
            :|.|||||::   .|.:||:.||||||:||||:|||||.|:|.|: |......:.|:|||..::.
Zfish   606 ILTEMDGMTN---KKNVFIIGATNRPDIIDPAILRPGRLDQLIYI-PLPDMPSRTAILRANLRKS 666

  Fly   807 ALDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRRTIDGHL-----------SGTISEKELV 860
            .:...||:..:: ::....|||||..||..|...|:|..|:..:           :....:.:.|
Zfish   667 PVAKDVDLMYLS-KITEGFSGADLTEICQRACKLAIREAIEAEIRAERQRQARKETAMDDDYDPV 730

  Fly   861 PENVIVQEEDFTKSFNKFVPSISAKDLEYF 890
            ||   ::::.|.::......|:|..|:..:
Zfish   731 PE---IRKDHFEEAMRFARRSVSDNDIRKY 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex6NP_001027403.2 SpoVK <367..600 CDD:440232 54/247 (22%)
RPT1 <609..883 CDD:440835 123/296 (42%)
zgc:136908NP_001035017.1 CDC48 27..766 CDD:273521 235/873 (27%)

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