DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex6 and Pex1

DIOPT Version :9

Sequence 1:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster


Alignment Length:919 Identity:217/919 - (23%)
Similarity:385/919 - (41%) Gaps:237/919 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 LTPIPNRLYDLLIKN-----------EQIKSEHLVFASQE--------VYENYAESPDVNFVNLV 127
            |||:.:......:||           |::|.:....:|:.        ::...|:..|| |||  
  Fly   206 LTPLTHSSTVSNVKNTIQRNKRQDHMERLKKDLRRESSRSFEFRVIRGLWREQAQESDV-FVN-- 267

  Fly   128 IRGRRVRIGKPL--------------ASDEGN--MTQTVIKQMLQEAPHTIVAQILPAAQCQPN- 175
                    ||.|              |:|:..  ..:||...:..:.|.|    |.|:.:...| 
  Fly   268 --------GKHLPEFFDLDLFYCMHTAADKDYYVRVRTVEDDIEDDLPET----IHPSIELNANL 320

  Fly   176 --CLYVQENFYGNILDRFQIRSNCWV-----QVEHFADEQTIPGIATKAHVYLVADPHELPAELT 233
              .|.::|      |:|..:|....|     ::|.||:::|        |..::.:..:      
  Fly   321 MKLLGIKE------LERVVLRPKTTVVNFVEKIELFANKKT--------HYKIMENAFK------ 365

  Fly   234 EVILSNYFNTPRLMHRGHTYRIEVNAELVGTATYAHYYLIFAHLRHVHLKCIHL-ETKGSEFELQ 297
            ..::....:.|.|.::....|:|  .:|:.|..     ::..|.|:..:....| |:|....:|.
  Fly   366 RFVIERTQHKPMLFNQEEVVRLE--DDLLVTVG-----ILPEHFRYCVVDAQFLKESKIYAADLV 423

  Fly   298 AIVAK------------NFSNLVQVPASHSFLPRQVLDSMAIVENYPSGLRKPYKLLRSSVDAFL 350
            ..|.:            :..:|:|:| .:..:..||:..:                         
  Fly   424 RPVGEIIKEETPPTSPLSVQDLIQLP-EYDKIVDQVVQEL------------------------- 462

  Fly   351 PKKSACLSSKHIFPVF-----LLQGERGSGKSKLVSAVAQEL-------------GMHIYGADCA 397
             :.:.|||:.:  .|.     ||.|..|:||:.||..:..:|             |....|....
  Fly   463 -RMNLCLSADN--SVMRQCNVLLAGASGTGKTVLVERILDQLSRKPDYCHFEFFHGSRSKGRKTE 524

  Fly   398 EIVSQVPSHTEMKLKAVFAKSQVCEPLMICFHNFEIF--GIDNEGNEDLRLLSAFHVQVQELFNR 460
            .|        :..|:.:|.......|.::...|.::.  ....:.::|           .|.:||
  Fly   525 SI--------QKDLRNIFTSCLQHAPAIVVLENLDVLAHAAGEQSSQD-----------GEYYNR 570

  Fly   461 --DRKHPIVVVALTSDRHLKPMIQGLFLEIINIDMPSKEERFEILRWMHVRETFNDIIYNQKAIE 523
              |..:.::|...|::..       ..:..:| ::.:..:|....|..||.:|          :.
  Fly   571 MADTVYQLIVQYTTNNAI-------AVIATVN-ELQTLNKRLSSPRGRHVFQT----------VA 617

  Fly   524 QLPLFSRENQSQFMPRISPSWRETLNVLQDV-----AAKSQGFLLGDLQLLYDNAVRMKIRNRLG 583
            :||...|.::...:..:.    ..:||.:|:     :..::|:...||....:.|:....|....
  Fly   618 RLPNLERADREIILRELC----SHINVAKDLDLVKFSNLTEGYRKCDLVQFVERAIFYAYRISKT 678

  Fly   584 RTTLDMSHFAKNLTDMQS---------------SFADSLGAPKVPKVYWSDIGGLAKLKDEIQSS 633
            :..|......::|....|               :.|:.:...::|        ||..:...::..
  Fly   679 QPLLTNDQLIESLEHTNSYCLQGIQSNQRTGNDADANEMRVEELP--------GLESVVGVLEEV 735

  Fly   634 IGLPLKHVHLMGKN-LR-RSGILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQ 696
            :..|.::..:...: || ::|:|||||||||||.:...:||..||..:||:|||||..|:||||:
  Fly   736 LMWPSRYPTIFNASPLRNQAGVLLYGPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQSEE 800

  Fly   697 NVREVFSRARSAAPCVLFLDELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFIL 761
            |||.:|:|||||.|||||.||.|||||.||  .||.||.||||:|||.|:||:   :..:.:.::
  Fly   801 NVRNLFNRARSARPCVLFFDEFDSLAPKRG--HDSTGVTDRVVNQLLTELDGV---EGLQGVTVI 860

  Fly   762 AATNRPDLIDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMS 826
            |||:||:|:||||||.||.|:|... |...|..:..:..|.:...:||..||.:..|.: .:..:
  Fly   861 AATSRPELLDPALLRSGRIDRLVEC-PLPDAPARVRIFEALSSTLSLDECVDFDWFAGK-TANYT 923

  Fly   827 GADLYSICSNAWLSAVRRTID--GHLSGTISEKELVPENVIVQEEDFTKSFNKFVPSISAKDLEY 889
            |||:.||.::|.::||:..:.  ||        |.:.:.:.::::...:||....||:||.|:..
  Fly   924 GADIQSILTSANMAAVKEALAQFGH--------EKLAKKISLKQKHLIESFQTTRPSLSASDVAK 980

  Fly   890 FNNLKASYS 898
            ::...|.::
  Fly   981 YHRTYARFT 989

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex6NP_001027403.2 SpoVK 367..847 CDD:223540 147/518 (28%)
P-loop_NTPase 367..492 CDD:304359 24/141 (17%)
AAA 653..787 CDD:278434 80/133 (60%)
Pex1NP_652016.1 PEX-1N 93..168 CDD:286361
SpoVK 479..974 CDD:223540 154/558 (28%)
P-loop_NTPase 480..604 CDD:304359 24/150 (16%)
AAA 757..887 CDD:278434 80/135 (59%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445211
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23077
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.