DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex6 and atad1a

DIOPT Version :9

Sequence 1:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001004640.1 Gene:atad1a / 368672 ZFINID:ZDB-GENE-030616-593 Length:380 Species:Danio rerio


Alignment Length:283 Identity:91/283 - (32%)
Similarity:150/283 - (53%) Gaps:15/283 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   595 NLTDMQSSFADSLGAPKVPKVYWSDIGGLAKLKDEIQSSIGLPLKHVHLM-GKNLRR--SGILLY 656
            :||:.:.:.|..|..|:..||.|.|:.||.::..|:|.::.||.:..||. |..|.:  .|:|||
Zfish    71 SLTEYEMNIATLLVDPRSIKVTWRDVAGLDEIISEMQDTVILPFQKRHLFSGSKLLQPPKGVLLY 135

  Fly   657 GPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVREVFSRARSAAPCVLFLDELDSL 721
            ||||.||||:|||.|......|:::|...|.:.:.|:|::....|||.|....||::||||:||.
Zfish   136 GPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSF 200

  Fly   722 APNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFILAATNRPDLIDPALLRPGRFDKLFYV 786
            ..||.........|  :.:|.::..||:..|:.|: :.::.|||||..:|.|:||  |....|:|
Zfish   201 LRNRSSMDHEATAM--MKAQFMSLWDGLDTGENSQ-VMVMGATNRPQDVDAAILR--RMPTAFHV 260

  Fly   787 GPCSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRRTIDGHLS 851
            | ...|..:..:||.......|...:::::||.:.:. .||:||..:|.:|.:..||..:...  
Zfish   261 G-LPNAAQREEILRLILSGENLSNAINLKEIASQSEG-YSGSDLKELCRDAAMYRVRDYVRKQ-- 321

  Fly   852 GTISEKELVPENVIVQEEDFTKS 874
               ..|::..:..:.:||:...|
Zfish   322 ---QMKQIAQQFQLDEEEEHVDS 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex6NP_001027403.2 SpoVK 367..847 CDD:223540 87/254 (34%)
P-loop_NTPase 367..492 CDD:304359
AAA 653..787 CDD:278434 51/133 (38%)
atad1aNP_001004640.1 AAA 128..254 CDD:214640 50/130 (38%)
AAA 132..262 CDD:278434 53/135 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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