DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex6 and CG5776

DIOPT Version :9

Sequence 1:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001260420.1 Gene:CG5776 / 34680 FlyBaseID:FBgn0032450 Length:799 Species:Drosophila melanogaster


Alignment Length:883 Identity:232/883 - (26%)
Similarity:379/883 - (42%) Gaps:187/883 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 IPNRLYDLLIKNEQIKSEHLVFA-SQ-----EVYENYAESPDVNFVNLVIRGRRVRIGKPLASDE 143
            ||::..|        ..|.|.|| ||     :....|..|..:...:|..|...|...|.|.:..
  Fly    24 IPSKARD--------NHEGLCFAISQDDVGPDSEAEYVRSGAIYTRSLQQRNFEVESLKDLPTKY 80

  Fly   144 GNMTQTVIKQMLQ------------EAPHT----IVAQILPAAQCQPNCLYVQENFY-------- 184
            .||...|.:..:|            |||.|    :|..:.|.::.....::|.|..:        
  Fly    81 ANMLVFVSEGAMQLAQLHIGQHVVLEAPSTAEQPLVRIVWPTSEQFLTTVFVSEGDFKLHCTQLR 145

  Fly   185 GNI-----LDRFQIRSNCWVQVEHF-ADEQTIPGIATKAHVYLVADPHELPAELT-------EVI 236
            |.:     |...::.:...:.::|. ..|.::..:..:..:.|      |..::.       .:|
  Fly   146 GKLLKISALHPSRLTAAASISLKHVNTTETSLKSVQLQDAIAL------LKRDMVNRVFYKDSLI 204

  Fly   237 LSNYFNTPRLMHRGHTYRIE-----VNAELVGTATYAHYYLIFAHLRHVHLKCIHLETKGSEFEL 296
            ..|:||      :..|:|:|     |...|.|                     :.|::|    .|
  Fly   205 HMNFFN------KSLTFRLERWQSTVEEALAG---------------------LSLDSK----PL 238

  Fly   297 QAIVAKNFSNLVQVPASHSFLPRQVLDSMAIVENYPSGLRKPYKLLRSSVD---AFLPKKSACLS 358
            |.|...|.:.|..:....:....:...|..|.:....||.:..:|:..|::   .|....:....
  Fly   239 QFIQVTNVTKLHLITDDANQQEEEQKISHRITKCQIGGLDRQLQLVEESMEYALGFRTLPAGLRV 303

  Fly   359 SKHIFPVFLLQGERGSGKSKLVS---AVAQELG---MHIYGADCAEIVSQVPSHTEMKLKAVF-- 415
            |:.:    ||.|..|.|||.::.   |||:|..   :.:...:..|:.|:....||.||.|:|  
  Fly   304 SRGL----LLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYSKFLGETEQKLGAIFER 364

  Fly   416 AKSQVCEPLMICF---HNFEIFGIDNEGNEDL--RLLSAFHVQVQELFNRDR-KHPIVVVALTSD 474
            |.:....|.::..   ||.    ...:.|.||  |:..||...:.:|.:..: |.....|..||.
  Fly   365 AYNHYPHPTLLLIEDVHNL----CPKQENSDLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSS 425

  Fly   475 R--HLKPMIQ--GLFLEIINIDMPSKEERFEILRWMHVRETFNDIIYNQKAIEQLPLFSRENQSQ 535
            :  .|.|.|:  |.....:.:..||.:.|.||:|.:            .|::|. .|...|    
  Fly   426 QIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCL------------IKSVEH-QLSDEE---- 473

  Fly   536 FMPRISPSWRETLNVLQDVAAKSQGFLLGDLQLLYDNAVRMKIRNRLGRTTLDMSHFAKNLTDMQ 600
                           ::.||:.:.|::..||..|...|:.....|     .|.|.|....||.::
  Fly   474 ---------------VEHVASITHGYVGADLANLVYAAMLQAQPN-----PLQMPHLQAALTRIK 518

  Fly   601 SSFADSLGAPKVPKVYWSDIGGLAKLKDEIQSSIGLPLKHV---HLMGKNLRRSGILLYGPPGTG 662
            .|....: ..:.|.|.||||||.::|:..:|.:|..||.|.   ..:|....| |||::||||..
  Fly   519 PSAMREV-LIECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPR-GILMFGPPGCS 581

  Fly   663 KTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVREVFSRARSAAPCVLFLDELDSLAPNRGV 727
            ||::|||:|||..|:|||::||||.:|:||:||:.|||||.:||..||.::|.||:|::...|..
  Fly   582 KTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSE 646

  Fly   728 A-GDSGG--VMDRVVSQLLAEMDGMSDGDTSKPIFILAATNRPDLIDPALLRPGRFDKLFYVGPC 789
            . |.|.|  |.:||::|||.|:||:   :..:.:.|:|||||||:||.|||||||.|::.||| .
  Fly   647 GDGSSSGSSVKERVLTQLLTELDGV---EALQNVTIVAATNRPDMIDKALLRPGRIDRILYVG-L 707

  Fly   790 STAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRRTIDGHLSGTI 854
            ...|.:..:|:.:.:...:...||||::.: |....|||::.::|..|.|.|:.::.:..     
  Fly   708 PQCEARREILKIKLRAMPISNDVDMEKLVQ-LTEGYSGAEIQAVCHEAALRALEQSFEAE----- 766

  Fly   855 SEKELVPENVIVQEEDFTKSFNKFVPSISAKDLEYFNN 892
                      .|:..||..:.....|..|.:.|:.:.:
  Fly   767 ----------DVKWTDFEHALKAVPPRTSPELLKLYED 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex6NP_001027403.2 SpoVK 367..847 CDD:223540 167/503 (33%)
P-loop_NTPase 367..492 CDD:304359 38/142 (27%)
AAA 653..787 CDD:278434 72/136 (53%)
CG5776NP_001260420.1 SpoVK 288..785 CDD:223540 173/563 (31%)
AAA 307..447 CDD:278434 38/147 (26%)
AAA 572..707 CDD:278434 74/138 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445209
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23077
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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