DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex6 and Spata5l1

DIOPT Version :9

Sequence 1:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001028428.2 Gene:Spata5l1 / 214616 MGIID:3036261 Length:747 Species:Mus musculus


Alignment Length:599 Identity:170/599 - (28%)
Similarity:267/599 - (44%) Gaps:111/599 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 LRKP--YKLLRSSVDAFLPKKSACLSSKHIFPVFLLQGERGSGKSKLVSAVAQELGMHIYGADCA 397
            ||.|  |.|..:::...:|:.            .||.|..|.||::||.|||:|.|..:......
Mouse   209 LRLPLRYPLALAALGLAVPRG------------VLLAGPPGVGKTQLVRAVARETGAELLAVSAP 261

  Fly   398 EIVSQVPSHTEMKLKAVFAKSQVCE---PLMICFHNFEIF----GIDNEGNED------LRLLSA 449
            .:....|..||..::.:|.::|...   |.::.....:..    |..:...|.      |.||..
Mouse   262 ALQGSRPGETEENVRRIFQRAQELASRGPSLLFLDEVDALCPRRGGPHRAPESRVVAQVLTLLDG 326

  Fly   450 FHVQVQELFNRDRKHPIVVVALTSDRHLKPMIQ--GLFLEIINIDMPSKEERFEILRWMHVRETF 512
            .|        |||:. :||.|......|.|.::  |.|...:.|..|:.::|..||         
Mouse   327 IH--------RDREF-VVVGATNRPDELDPALRRPGRFDREVVIGTPTLKQREAIL--------- 373

  Fly   513 NDIIYNQKAIEQLPLFSRENQSQFMPRISPSWRETLNVLQDVAAKSQGFLLGDLQLLYDNAVR-- 575
                  |....::|:.|..:               |.:|.::..   |::..||..|...|..  
Mouse   374 ------QVITSKMPISSHID---------------LGLLAEMTV---GYVGADLTALCREAAMCA 414

  Fly   576 -MKIRNRLGRTTLDMSHFAKNLTDMQ-SSFADSLGAPKVPKVYWSDIGGLAKLKDEIQSSIGLPL 638
             :|.........::.:.|.:....:| |||..|.|...:..|.|..||||..:|.:::..:..||
Mouse   415 LLKNEKNQDSPKIEETDFLEAFKKIQPSSFRSSTGLMDIKPVGWEQIGGLEDVKLKLKQCVEWPL 479

  Fly   639 K---HVHLMGKNLRRSGILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVRE 700
            |   ....||.. :..|:|||||||..||.:.:|:||.|:.||:||.|.:|.:.:||.||:.:.:
Mouse   480 KFPQEFARMGLT-QPKGLLLYGPPGCAKTTLVRALATGCHCSFVSVCGADLFSPFVGDSEKVLSQ 543

  Fly   701 VFSRARSAAPCVLFLDELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMS--------------- 750
            ||.:||:..|.::||||:||:..:|.|........:||:|.||.|:||:.               
Mouse   544 VFRQARANTPALVFLDEIDSVLGSRSVGTSGCDARERVLSVLLNELDGVGVRTVERRGSKASQQE 608

  Fly   751 -DGDTSKPIFILAATNRPDLIDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDM 814
             ....|:.:.|:.||||||::|.|||||||.||:.||.| ...|.:.::|:..|....:...|.:
Mouse   609 CQEILSRSVMIVVATNRPDVLDDALLRPGRLDKIIYVPP-PDQEGRLSILKVCTNNMPVGPDVSL 672

  Fly   815 EQIAERLKSEMSGADLYSICSNAWLSAVRRTIDGHLSGTISEKELVPENVIVQEEDFTKSFNKFV 879
            |.:|.. ....|||||.::|..|.|.|            :.|..|  |...|::|.||::.....
Mouse   673 ENLAAE-TCFFSGADLRNLCKEAALFA------------LQENGL--EATTVRQEHFTEALKTVK 722

  Fly   880 PSISAKDLEYFNNL 893
            ||::.|:|.::.||
Mouse   723 PSLTLKELTFYENL 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex6NP_001027403.2 SpoVK 367..847 CDD:223540 151/517 (29%)
P-loop_NTPase 367..492 CDD:304359 35/139 (25%)
AAA 653..787 CDD:278434 63/149 (42%)
Spata5l1NP_001028428.2 CDC48 14..738 CDD:273521 170/599 (28%)
AAA 230..362 CDD:278434 35/140 (25%)
AAA 496..646 CDD:278434 63/149 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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