DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex6 and prx-1

DIOPT Version :9

Sequence 1:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_510386.2 Gene:prx-1 / 181538 WormBaseID:WBGene00004191 Length:996 Species:Caenorhabditis elegans


Alignment Length:1024 Identity:256/1024 - (25%)
Similarity:421/1024 - (41%) Gaps:284/1024 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KKKKVVGKRNSVSFDQQDPGQPR----FSFSGRVQELVEG-YNSAIQLLAPKW--PWFLYPGYLT 65
            |::.::.|..|.::.......||    :|...:.|..:|. :.:.|:|::...  |.||.||   
 Worm    88 KQEVILEKMESKTYCSHIEVAPRTEDDYSVIAQSQSSIENEFLNQIRLVSQNMIIPHFLSPG--- 149

  Fly    66 YAVYWRYAKYYKGKFLLTPIPNRLYDLLIKNEQIKSEHLVFASQEVYENYAESPDVNFVNLVIRG 130
              ||.::.       :|..:|.....:::.|:   :|..|....|..:|..::.....|:.:::.
 Worm   150 --VYVQFR-------ILNIVPASNKPVMLNND---TELHVQTVTEGSQNDEKATMAQKVSNIVQD 202

  Fly   131 RRVRIGKPLASDEGNMTQTVIKQMLQEAPHTIVAQILPAAQCQ--------------------PN 175
                     .|.:|.::..||.  |::.|  |:.::||....:                    .:
 Worm   203 ---------LSMQGFLSNYVIN--LEKTP--IIGRVLPKKTVELWVKSGLEKLDKSTIYIPGKES 254

  Fly   176 CLYVQENFYGNILDRFQIRSNCWVQVEHFADEQTIPGIATKAHVYLVADPHELPAELTEVILSNY 240
            |||.:   :|.:..|.|.|.....:.:.|.       :....::||....:||.|.     ||:.
 Worm   255 CLYSE---HGIVEIRSQGRGENEERFQFFY-------LHRSPNIYLRNQSNELDAS-----LSHM 304

  Fly   241 FNTPRLMHRGH----TYRIE--VNAELVG-------TATYAHYYL---IFA-----HLRHVHLKC 284
            |.:.:|.:|.|    |..:|  :|.::.|       |..|....:   .|.     .|.:|..|.
 Worm   305 FESLQLENRCHCVEGTNTLEPYMNIKIFGVTQNRICTLRYCEIMMEKETFQWVKEFELTNVLTKS 369

  Fly   285 IHLETKGSEF-------ELQAIVAKNFSNLVQVPASHSFLPR-----------------QVLDSM 325
            :|.|.:|:..       ||...|......|..||:....:.|                 |.|..:
 Worm   370 LHSELQGNPILLSVEGKELDVAVDDKAIRLKVVPSMKGLVKRVTENTCFLFDLTTELIFQQLGDL 434

  Fly   326 --------------------------------AIVENYPSGLRKPY-------KLLRSSVDAFLP 351
                                            :.:||:.....|.:       ||| |.:|    
 Worm   435 KQKHGDTENTRRRRKRTEEAEASEQIPQKPETSTMENFGFAQNKHFVQIGSHSKLL-SELD---- 494

  Fly   352 KKSACLSSKHIFPVFLLQGERGSGKSKLVSAVAQELGMHIYGADC------------AEIVSQVP 404
             |..|...:|:    ::.|..||||:..:..:|:.|..:.....|            |:|:.::.
 Worm   495 -KVCCGGKQHV----MVLGGNGSGKTTFIKKLARRLSHNSSVTFCKMVPCALLKGRSADIIEKLL 554

  Fly   405 SHT--EMKLKAVFAKSQVCEPLMICFHNFEIF--GIDNEGNEDLRLLSAFHVQVQELFNRDRKHP 465
            |.|  ||::|         :|..:...:|::.  .||.| ...|.:.....|..|:|  |..:..
 Worm   555 SDTLHEMEVK---------KPSCLFLDDFDVILPQIDQE-QRHLAMEKVVSVFAQKL--RTTEVS 607

  Fly   466 IVVVALTSDRHLKPMIQGLFLEI----------INIDMPSKEERFEILRWMHVRETFNDIIYNQK 520
            :|:||    :.|..:..|...::          |.::..:||:|.||.      |||.|      
 Worm   608 VVLVA----QRLSSLNDGFVEQVMRARPIVSRKIELEQLTKEDRCEIF------ETFLD------ 656

  Fly   521 AIEQLPLFSRENQSQFMPRISPSWRETLNVLQDVAAKSQGFLLGDLQLLYDNAVRMKIRNRLGRT 585
                ||                   |..:::.::..||.|:...:::.|   ||.:.:...:   
 Worm   657 ----LP-------------------ENSDIISEIVKKSDGYTFSEIEKL---AVSINVECAI--- 692

  Fly   586 TLDMSHFAKNLTDMQSSFA-DSLGAPKVPKV-------YWSDIGGLAKLKDEIQSSIGLPLKHVH 642
                 ...|.:|:::...| :...|.|:.|:       ...|:||:.:.|..::..|..|.|:..
 Worm   693 -----KGVKYITEIEVEKAFECFVAGKMGKIEDGQVLPTMEDVGGMFEQKKLLEQVIIWPRKYPQ 752

  Fly   643 L---MGKNLRRSGILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVREVFSR 704
            |   :|..:.: ||||:||.|.||||:|.|..:..|.|.::|:|||||:.|:|.||:|||.||.:
 Worm   753 LFESVGVPVSK-GILLHGPSGCGKTLLANATISNSNFSVVNVKGPELLSKYIGASEENVRLVFEK 816

  Fly   705 ARSAAPCVLFLDELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFILAATNRPDL 769
            |||.|||:||.||||||||.||  .||.||.||||:|||.|:||...|  .|.:.||..|:|.||
 Worm   817 ARSCAPCILFFDELDSLAPKRG--HDSTGVTDRVVNQLLTELDGAEGG--MKGVIILGCTSRIDL 877

  Fly   770 IDPALLRPGRFDKLFYVG-PCSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGADLYSI 833
            ||.|||||||||...|.| |..|  ::..:::..|.:.. ...||.|.:|::... .|||||..:
 Worm   878 IDDALLRPGRFDHHVYCGHPEKT--ERLDIMKVLTNKLK-PTDVDFECLAQKTDG-WSGADLQLL 938

  Fly   834 CSNAWLSAVRRTIDGHLSGTISEKE--LVPENVIVQEEDFTKSFNKFVP 880
            .:||.....|:         |:::|  |..:||.:.:......||..:|
 Worm   939 FTNAQFYNARQ---------IAKEEDGLEEDNVPIDQASIESVFNDSIP 978

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex6NP_001027403.2 SpoVK 367..847 CDD:223540 162/517 (31%)
P-loop_NTPase 367..492 CDD:304359 31/150 (21%)
AAA 653..787 CDD:278434 81/133 (61%)
prx-1NP_510386.2 PEX-1N 103..179 CDD:370392 19/90 (21%)
P-loop_NTPase 481..>522 CDD:393306 13/50 (26%)
SpoVK 511..938 CDD:223540 158/497 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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