DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex6 and atad1

DIOPT Version :9

Sequence 1:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster
Sequence 2:NP_001135501.1 Gene:atad1 / 100216041 XenbaseID:XB-GENE-5779938 Length:360 Species:Xenopus tropicalis


Alignment Length:314 Identity:96/314 - (30%)
Similarity:164/314 - (52%) Gaps:28/314 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   577 KIRNRLGRTTLDMSHFAKN--LTDMQSSFADSLGAPKVPKVYWSDIGGLAKLKDEIQSSIGLPLK 639
            |:..::|         .||  ||:.:.|.|..|..|....|.||||.||..:..:::.::.||::
 Frog    57 KLMRQIG---------VKNVKLTEYEMSIAAHLVDPLSMLVTWSDIAGLDDVITDLKDTVILPIR 112

  Fly   640 HVHLMGKNLR----RSGILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVRE 700
            ..:|. :|.|    ..|:|||||||.|||::|||.|.|....|:::|...|.:.:.|:|::....
 Frog   113 KRYLF-ENSRLLQPPKGVLLYGPPGCGKTMIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAA 176

  Fly   701 VFSRARSAAPCVLFLDELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFILAATN 765
            |||.|....|.::|:||:||...:|..:......|  :.:|.::..||: |.|.:..:.::.|||
 Frog   177 VFSLAVKLHPSIIFIDEIDSFLRSRSSSDHEATAM--MKAQFMSLWDGL-DTDFNCQVIVMGATN 238

  Fly   766 RPDLIDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGADL 830
            ||..:|.|::|  |....|::...| .:.:.|:|....:..::|:.||:.:|| |.....||:||
 Frog   239 RPQDLDTAIMR--RMPTRFHINQPS-LKQREAILDLILRNESVDSHVDLMEIA-RGSDGFSGSDL 299

  Fly   831 YSICSNAWLSAVRRTIDGHLSGTISEKELVPENVIVQEEDFTKSFNKFVPSISA 884
            ..:|.:|.|..||.:::..     ||:....|...:.::|..::.:|...|.||
 Frog   300 KEMCRDAALLCVRDSVNNS-----SEESPCEEIRPIHQQDLLRAIDKMKRSKSA 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex6NP_001027403.2 SpoVK 367..847 CDD:223540 88/275 (32%)
P-loop_NTPase 367..492 CDD:304359
AAA 653..787 CDD:278434 47/133 (35%)
atad1NP_001135501.1 AAA 125..254 CDD:214640 47/133 (35%)
AAA 129..257 CDD:278434 47/132 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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