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Protein Alignment His2A:CG33859 and H2ab3
DIOPT Version :9
Sequence 1: | NP_001027376.1 |
Gene: | His2A:CG33859 / 3772139 |
FlyBaseID: | FBgn0053859 |
Length: | 124 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001100439.1 |
Gene: | H2ab3 / 302783 |
RGDID: | 1561666 |
Length: | 116 |
Species: | Rattus norvegicus |
Alignment Length: | 101 |
Identity: | 37/101 - (36%) |
Similarity: | 63/101 - (62%) |
Gaps: | 2/101 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 KGGKVKGKAKSRSDRAGLQFPVGRIHRLLRKGNYA-ERVGAGAPVYLAAVMEYLAAEVLELAGN- 68
:|...:.:.:||:.||.|.|.|..:.:.||:|.:| .|:....|::|||::|:|...:||||||
Rat 10 RGSSSRRRRRSRTSRAELIFAVSLVEQHLREGGHARRRLSETVPIFLAAILEFLTRRLLELAGNE 74
Fly 69 AARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQ 104
|.|...::||.|..|.||:.::..|::|...:||::
Rat 75 AQRRGTQSRITPELLDLAVYSNTLLSELFQFITISR 110
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
His2A:CG33859 | NP_001027376.1 |
H2A |
16..121 |
CDD:197711 |
36/91 (40%) |
H2A |
16..119 |
CDD:238029 |
36/91 (40%) |
H2ab3 | NP_001100439.1 |
H2A |
25..116 |
CDD:305064 |
33/86 (38%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5262 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.900 |
|
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