DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2B:CG33888 and LOC101731959

DIOPT Version :10

Sequence 1:NP_001027335.1 Gene:His2B:CG33888 / 3772104 FlyBaseID:FBgn0053888 Length:123 Species:Drosophila melanogaster
Sequence 2:XP_004913866.1 Gene:LOC101731959 / 101731959 -ID:- Length:126 Species:Xenopus tropicalis


Alignment Length:173 Identity:41/173 - (23%)
Similarity:64/173 - (36%) Gaps:38/173 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 RLRQQRALHQ-QLGMVRPAW------RPQRGLP------ENSVSILRAWLFEHFLHPYPKESEKI 380
            |.::.|:|.| :||...|:|      ||||..|      :...|.||..:|         .|::|
 Frog    86 RAQRSRSLPQPKLGTQLPSWLLAPASRPQRRRPFLSGDEDPKASTLRVVVF---------GSDRI 141

  Fly   381 MLSKQTGLSKNQVANWFINARVRLW--KPMIEEMYKEEFGESAELLSNSNQDTKKMQETSQLKHE 443
                     ..:||..:.|.| ||.  :|::...:|.:|.......|:...........||....
 Frog   142 ---------SGKVARAYSNLR-RLENNRPLLTRFFKLQFFYVPVKRSHGTSPGACPPPRSQTPSP 196

  Fly   444 DSSSSQQQNQGNNNNNIPY---TSDAEQNLVFADPKPDRATTG 483
            .:.|.:..:.|..... |:   |:|....|...||..:|...|
 Frog   197 PTDSPRHASPGELGTT-PWEESTNDISHYLGMLDPWYERNVLG 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2B:CG33888NP_001027335.1 HFD_H2B 33..120 CDD:467035
LOC101731959XP_004913866.1 HFD_H2B 30..123 CDD:467035 13/36 (36%)
Blue background indicates that the domain is not in the aligned region.

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